##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138656_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7660427 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.79812221955773 33.0 33.0 33.0 33.0 33.0 2 32.79260085632302 33.0 33.0 33.0 33.0 33.0 3 32.790730595043854 33.0 33.0 33.0 33.0 33.0 4 36.73764726169964 37.0 37.0 37.0 37.0 37.0 5 36.75256810096879 37.0 37.0 37.0 37.0 37.0 6 36.762310769360504 37.0 37.0 37.0 37.0 37.0 7 36.75136372946312 37.0 37.0 37.0 37.0 37.0 8 36.74493027607991 37.0 37.0 37.0 37.0 37.0 9 36.74042517473243 37.0 37.0 37.0 37.0 37.0 10-11 36.714535821567125 37.0 37.0 37.0 37.0 37.0 12-13 36.69345364168342 37.0 37.0 37.0 37.0 37.0 14-15 38.95859192966658 40.0 40.0 40.0 37.0 40.0 16-17 38.9130652899636 40.0 40.0 40.0 37.0 40.0 18-19 38.951924873117385 40.0 40.0 40.0 37.0 40.0 20-21 38.98801874877417 40.0 40.0 40.0 37.0 40.0 22-23 39.01163479628855 40.0 40.0 40.0 37.0 40.0 24-25 39.01582816790195 40.0 40.0 40.0 37.0 40.0 26-27 38.92500717768101 40.0 40.0 40.0 37.0 40.0 28-29 38.85224417734665 40.0 40.0 40.0 37.0 40.0 30-31 38.78123731034647 40.0 37.0 40.0 37.0 40.0 32-33 38.461017056116916 40.0 37.0 40.0 37.0 40.0 34-35 38.604651908690684 40.0 37.0 40.0 37.0 40.0 36-37 38.57553294245268 40.0 37.0 40.0 37.0 40.0 38-39 38.603119901905984 40.0 37.0 40.0 37.0 40.0 40-41 38.574450452265495 40.0 37.0 40.0 37.0 40.0 42-43 38.27518351718581 40.0 37.0 40.0 37.0 40.0 44-45 38.176022376251254 40.0 37.0 40.0 37.0 40.0 46-47 38.196527005024635 40.0 37.0 40.0 37.0 40.0 48-49 38.060280401015675 40.0 37.0 40.0 37.0 40.0 50-51 38.1560072489495 40.0 37.0 40.0 37.0 40.0 52-53 38.1409088472375 40.0 37.0 40.0 37.0 40.0 54-55 38.083117425214176 40.0 37.0 40.0 37.0 40.0 56-57 37.96542721468163 40.0 37.0 40.0 35.0 40.0 58-59 37.8364290857908 40.0 37.0 40.0 33.0 40.0 60-61 37.59280603675721 38.5 37.0 40.0 33.0 40.0 62-63 37.408172031220474 37.0 37.0 40.0 33.0 40.0 64-65 37.24554891261709 37.0 37.0 40.0 33.0 40.0 66-67 37.01627081124444 37.0 37.0 40.0 33.0 40.0 68-69 36.74794553380228 37.0 37.0 40.0 33.0 40.0 70-71 36.30901878366164 37.0 37.0 38.5 33.0 40.0 72-73 36.21396706449154 37.0 37.0 37.0 33.0 40.0 74-75 35.98130953382474 37.0 37.0 37.0 33.0 40.0 76-77 33.90452620926705 35.0 33.0 37.0 27.0 37.0 78-79 35.32601940707844 37.0 33.0 37.0 33.0 37.0 80-81 35.63454547454095 37.0 37.0 37.0 33.0 37.0 82-83 35.639488620755834 37.0 37.0 37.0 33.0 37.0 84-85 35.55676716914219 37.0 37.0 37.0 33.0 37.0 86-87 35.13585642549147 37.0 33.0 37.0 33.0 37.0 88-89 35.06539407025926 37.0 33.0 37.0 33.0 37.0 90-91 35.2527874602574 37.0 33.0 37.0 33.0 37.0 92-93 35.26226556952177 37.0 33.0 37.0 33.0 37.0 94-95 35.21240782932663 37.0 33.0 37.0 33.0 37.0 96-97 35.16687052540067 37.0 33.0 37.0 33.0 37.0 98-99 35.13750158926224 37.0 33.0 37.0 33.0 37.0 100 35.0776132147015 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 1.0 19 7.0 20 27.0 21 113.0 22 492.0 23 1446.0 24 3632.0 25 7869.0 26 14248.0 27 23878.0 28 36539.0 29 52323.0 30 71135.0 31 95462.0 32 128104.0 33 175093.0 34 250712.0 35 393746.0 36 800683.0 37 2348290.0 38 3133958.0 39 122668.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.105355223670955 20.14425566616587 14.46256194334859 23.287827166814594 2 14.842057759965599 20.502107780675935 41.74759448787907 22.908239971479397 3 18.06279397429951 26.338883187793304 30.481725243628826 25.11659759427836 4 12.303558289000726 17.899415159479883 38.862336615173476 30.934689936345915 5 13.21422868922007 37.875464828888525 35.30935739082992 13.600949091061484 6 29.82145773336134 37.84358234860798 18.476567951107686 13.858391966922992 7 26.4786414647643 32.96170043784766 22.673892721645935 17.88576537574211 8 25.03447914848611 35.68315447689796 20.79824009810419 18.484126276511738 9 25.94098214107386 16.60129389654128 21.07336836445279 36.38435559793207 10-11 24.48901347144226 26.695430946603892 28.294538933665187 20.521016648288665 12-13 25.502801606229 24.30787474379692 28.358353914213918 21.83096973576016 14-15 22.661602284050222 25.480139684119436 26.625774255142698 25.23248377668764 16-17 21.649054289010262 28.59601037905589 27.248761720462838 22.506173611471006 18-19 21.562107438658444 27.578913029260637 29.42780474247715 21.431174789603766 20-21 22.793164437010407 26.69455213767833 29.2678911809995 21.244392244311765 22-23 22.396046469015793 26.607225140931067 29.130814722199066 21.865913667854077 24-25 21.991336937577856 26.761949776019335 29.418547384075993 21.828165902326816 26-27 21.93863339890055 26.9953260082307 29.21527444959639 21.850766143272367 28-29 21.750810140626665 27.146808082225654 29.323098266283036 21.779283510864644 30-31 22.106716692333308 26.83267521289997 29.275467197834637 21.785140896932088 32-33 21.971197327108175 27.086839509312497 28.989291115303846 21.952672048275485 34-35 21.967260040370867 27.141006450025362 29.16297469803028 21.72875881157349 36-37 22.110300004335564 27.031705533931067 29.092738992885376 21.765255468847993 38-39 21.865388820881396 27.132968839198828 29.098346200037504 21.903296139882265 40-41 22.21167421727773 26.929775399595535 29.088220437350376 21.770329945776364 42-43 22.17534863715335 27.073770696585576 28.697073088716195 22.053807577544884 44-45 22.178325110723083 27.322572846734843 28.398771535549876 22.1003305069922 46-47 22.262618006942052 27.162493402620964 28.141316462622463 22.43357212781452 48-49 22.374757754911005 27.346981154810372 27.929408358557318 22.348852731721305 50-51 22.083182615197046 27.580781929562388 27.67898011843894 22.657055336801626 52-53 22.05806010214748 27.535805736095735 27.613392720133817 22.792741441622965 54-55 22.400802286641508 27.238064673176705 27.74661462770195 22.61451841247984 56-57 22.338986344683093 27.04653503337407 27.689100215826777 22.925378406116064 58-59 21.938543556586755 26.93583902164559 28.08540317967458 23.040214242093082 60-61 22.311252387165595 27.316748908660376 27.952784683480186 22.41921402069384 62-63 21.93310430500423 27.388972996970374 27.91569624438629 22.762226453639105 64-65 21.607623940050598 27.759847580721814 27.643500884490198 22.989027594737394 66-67 21.773704168301034 28.276445078303347 27.131040854595334 22.81880989880029 68-69 21.940019943665437 28.11446291000162 27.051900213769347 22.893616932563592 70-71 21.95388102452553 27.471032469399397 27.036319277902614 23.538767228172457 72-73 22.23552510143709 27.07694123110769 27.10968418389329 23.57784948356193 74-75 22.19396467561356 27.177350909435326 27.233452028828214 23.395232386122892 76-77 22.54807015263289 27.080011946932096 26.562463729764108 23.8094541706709 78-79 22.812735236751447 27.042607955479873 26.180409473573597 23.96424733419508 80-81 22.43902404370308 27.367436949650337 26.500888326596026 23.692650680050555 82-83 22.651261350044777 27.08419539065593 26.56781441390683 23.69672884539246 84-85 22.909026753973507 27.398256915131807 26.348949999951643 23.343766330943044 86-87 22.992907340483573 27.412358983843994 26.578826725058313 23.01590695061412 88-89 23.094876588806656 27.360769676393694 26.82109932933835 22.7232544054613 90-91 22.972594055644922 26.982597112875105 26.788208921280905 23.256599910199068 92-93 22.933302309006347 26.58397018694913 26.96285112440125 23.51987637964327 94-95 22.150825696797384 26.958247484479653 27.625598148520925 23.26532867020204 96-97 22.228888682175455 26.89286298852691 27.85908973554961 23.019158593748028 98-99 23.43022581416434 28.796331673875013 28.127387690654242 19.646054821306404 100 22.664445701744544 29.80324447086366 21.67219321678639 25.860116610605406 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1476.0 1 1472.0 2 2419.5 3 3634.5 4 5502.5 5 9571.5 6 12559.5 7 14253.0 8 15210.5 9 14656.0 10 13241.0 11 12017.5 12 13527.5 13 18872.5 14 30391.0 15 45350.0 16 57066.0 17 63643.5 18 64354.0 19 59444.5 20 51641.5 21 43387.5 22 37555.5 23 36689.5 24 40240.0 25 47359.5 26 58733.0 27 72689.0 28 84522.0 29 97058.5 30 109310.5 31 120866.5 32 138421.5 33 157433.0 34 175085.0 35 193221.5 36 214681.5 37 236051.0 38 245399.5 39 249362.0 40 258658.5 41 264474.5 42 268180.5 43 278519.0 44 288955.5 45 298504.5 46 307422.0 47 316959.0 48 327205.5 49 328170.0 50 322394.0 51 315417.5 52 304894.5 53 291779.5 54 276062.5 55 259124.0 56 240025.0 57 216947.0 58 191863.5 59 167334.0 60 139843.5 61 110118.5 62 85063.5 63 63983.0 64 46966.0 65 34049.5 66 24568.0 67 18144.0 68 13546.0 69 9905.5 70 7127.0 71 5071.5 72 3627.5 73 2414.5 74 1536.0 75 981.0 76 616.5 77 377.0 78 245.0 79 161.0 80 110.5 81 77.5 82 57.0 83 40.5 84 29.0 85 16.5 86 10.5 87 9.0 88 6.5 89 3.5 90 2.0 91 2.0 92 1.0 93 0.0 94 0.5 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.001383734875353554 4 0.01178785464570056 5 0.011592043106735435 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 3.263595092806201E-5 22-23 0.0 24-25 0.005314479770210774 26-27 0.04570953422905473 28-29 0.0815148710568692 30-31 0.07466835243069701 32-33 0.033874945278051155 34-35 0.002713535662543651 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 1.415664712270748E-4 56-57 3.0497939864162176E-4 58-59 7.106910390103997E-6 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 1.6545004480312007E-4 72-73 0.012785733429605957 74-75 0.02821125470417499 76-77 0.0026616808638454293 78-79 0.0 80-81 0.0 82-83 0.006802944071744662 84-85 0.04544403966496923 86-87 0.03815794572665201 88-89 0.008921823917105392 90-91 4.9981939859064254E-5 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 96.0 20-21 443.0 22-23 992.0 24-25 2272.0 26-27 2851.0 28-29 8654.0 30-31 20067.0 32-33 25558.0 34-35 35166.0 36-37 47340.0 38-39 35852.0 40-41 60274.0 42-43 68293.0 44-45 83417.0 46-47 80664.0 48-49 69394.0 50-51 38503.0 52-53 13411.0 54-55 13658.0 56-57 14569.0 58-59 38112.0 60-61 65188.0 62-63 64729.0 64-65 67192.0 66-67 71661.0 68-69 67078.0 70-71 64389.0 72-73 61443.0 74-75 61933.0 76-77 61315.0 78-79 64871.0 80-81 65900.0 82-83 62879.0 84-85 64425.0 86-87 65627.0 88-89 70869.0 90-91 75594.0 92-93 78726.0 94-95 85680.0 96-97 256798.0 98-99 497900.0 100-101 5026644.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.22881390072637 #Duplication Level Percentage of deduplicated Percentage of total 1 87.31723718540798 69.18041135288271 2 8.038846132729569 12.738164884532097 3 2.397296803694027 5.698049469740407 4 0.9566743413074091 3.031846934041788 5 0.4676971573465775 1.8527545520655362 6 0.2542113478393866 1.2084518141651746 7 0.1559297977614968 0.8647893049896469 8 0.09659768992928253 0.6122656318917755 9 0.06579833557487277 0.4691811675815224 >10 0.23827253359899164 2.950097629465029 >50 0.006932880964896816 0.36795248834687155 >100 0.003978066284281411 0.5831702392050746 >500 3.8700021388035025E-4 0.24420544963287555 >1k 1.4072734728431084E-4 0.19865908145957142 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.3054102597675038E-5 0.0 5 0.0 0.0 0.0 1.3054102597675038E-5 0.0 6 0.0 0.0 0.0 1.3054102597675038E-5 1.3054102597675038E-5 7 0.0 0.0 0.0 1.3054102597675038E-5 1.3054102597675038E-5 8 0.0 0.0 0.0 1.3054102597675038E-5 1.3054102597675038E-5 9 0.0 0.0 0.0 3.916230779302511E-5 1.3054102597675038E-5 10-11 0.0 0.0 0.0 5.2216410390700145E-5 1.3054102597675038E-5 12-13 0.0 0.0 0.0 7.832461558605022E-5 1.3054102597675038E-5 14-15 0.0 0.0 0.0 1.3054102597675037E-4 5.8743461689537665E-5 16-17 0.0 0.0 0.0 1.8928448766628806E-4 1.044328207814003E-4 18-19 0.0 0.0 0.0 2.676091032523383E-4 1.3054102597675037E-4 20-21 0.0 0.0 0.0 4.373124370221138E-4 1.3054102597675037E-4 22-23 0.0 0.0 0.0 0.0010247470539174906 1.5012217987326291E-4 24-25 0.0 0.0 0.0 0.003237417444223409 1.697033337697755E-4 26-27 0.0 0.0 0.0 0.00820450348263876 1.8275743636745053E-4 28-29 0.0 0.0 0.0 0.024528658781031398 1.9581153896512557E-4 30-31 0.0 0.0 0.0 0.028986634818137423 1.9581153896512557E-4 32-33 0.0 0.0 0.0 0.03662981188907616 1.9581153896512557E-4 34-35 0.0 0.0 0.0 0.044873477679507945 2.3497384675815069E-4 36-37 0.0 0.0 0.0 0.0611323624649122 2.3497384675815069E-4 38-39 0.0 0.0 0.0 0.22231789428970472 2.5455500065466323E-4 40-41 0.0 0.0 0.0 0.39141421228868833 2.6108205195350074E-4 42-43 0.0 0.0 0.0 0.42734562968878886 2.6108205195350074E-4 44-45 0.0 0.0 0.0 0.4789941866164902 2.6760910325233824E-4 46-47 0.0 0.0 0.0 0.5302054311071693 3.067714110453634E-4 48-49 0.0 0.0 0.0 0.577337268536075 3.39406667539551E-4 50-51 0.0 0.0 0.0 0.6215776222395958 3.39406667539551E-4 52-53 0.0 0.0 0.0 1.0940382305059495 3.52460770137226E-4 54-55 0.0 0.0 0.0 1.723428733150254 3.6551487273490105E-4 56-57 0.0 0.0 0.0 2.407652993756092 3.7204192403373856E-4 58-59 0.0 0.0 0.0 3.110107308639584 3.785689753325761E-4 60-61 0.0 0.0 0.0 3.303869353496874 3.785689753325761E-4 62-63 0.0 0.0 0.0 3.3109968935152048 3.9162307793025113E-4 64-65 0.0 0.0 0.0 3.3173216062237785 3.9162307793025113E-4 66-67 0.0 0.0 0.0 3.3225758825193425 3.9162307793025113E-4 68-69 0.0 0.0 6.527051298837519E-6 3.3281695654824466 3.981501292290887E-4 70-71 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3331301244695632 4.112042318267637E-4 72-73 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3368897060176934 4.8300179611397644E-4 74-75 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3398921496151583 4.8300179611397644E-4 76-77 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3429011202639227 4.8300179611397644E-4 78-79 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.345055047192539 4.8300179611397644E-4 80-81 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3456751170659285 4.8300179611397644E-4 82-83 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3461189565542497 4.8300179611397644E-4 84-85 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3462886598880193 4.8300179611397644E-4 86-87 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.346380038606203 4.960558987116515E-4 88 0.0 1.3054102597675038E-5 1.3054102597675038E-5 3.3463930927088006 4.960558987116515E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14485 0.0 49.659565 1 GTATCAA 25770 0.0 36.764313 1 ATCAACG 31635 0.0 29.475773 3 TCAACGC 32070 0.0 29.168436 4 CAACGCA 32250 0.0 28.922388 5 TATCAAC 32645 0.0 28.85169 2 AACGCAG 32775 0.0 28.572645 6 ATCTCGT 11360 0.0 27.108175 94 ACGCAGA 36625 0.0 25.475832 7 CGCAGAG 37025 0.0 25.177536 8 GCAGAGT 40955 0.0 22.698965 9 GTGGTAT 7025 0.0 21.403048 1 GAGTACT 24395 0.0 21.031853 12-13 TATCTCG 13670 0.0 20.527035 94 TACATGG 29035 0.0 20.34603 2 GTACATG 30390 0.0 19.958916 1 CAGAGTA 41270 0.0 19.78372 10-11 TGGTATC 7210 0.0 19.668991 2 ACATGGG 29930 0.0 19.523544 3 GTACTTT 26805 0.0 19.109732 14-15 >>END_MODULE