##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138651_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8475193 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.774635220696446 33.0 33.0 33.0 33.0 33.0 2 32.772476449798845 33.0 33.0 33.0 33.0 33.0 3 32.7723411136478 33.0 33.0 33.0 33.0 33.0 4 36.715955849029044 37.0 37.0 37.0 37.0 37.0 5 36.73094689407073 37.0 37.0 37.0 37.0 37.0 6 36.740763779656696 37.0 37.0 37.0 37.0 37.0 7 36.72869184217988 37.0 37.0 37.0 37.0 37.0 8 36.721700614959445 37.0 37.0 37.0 37.0 37.0 9 36.719390815052826 37.0 37.0 37.0 37.0 37.0 10-11 36.69062226665517 37.0 37.0 37.0 37.0 37.0 12-13 36.670654343800784 37.0 37.0 37.0 37.0 37.0 14-15 38.90518398814045 40.0 40.0 40.0 37.0 40.0 16-17 38.85827136915938 40.0 37.0 40.0 37.0 40.0 18-19 38.890893104145235 40.0 40.0 40.0 37.0 40.0 20-21 38.92819511923527 40.0 40.0 40.0 37.0 40.0 22-23 38.95137792978079 40.0 40.0 40.0 37.0 40.0 24-25 38.95941528698027 40.0 40.0 40.0 37.0 40.0 26-27 38.86815619054289 40.0 40.0 40.0 37.0 40.0 28-29 38.79157284837001 40.0 38.5 40.0 37.0 40.0 30-31 38.73121572614698 40.0 37.0 40.0 37.0 40.0 32-33 38.42302764513432 40.0 37.0 40.0 37.0 40.0 34-35 38.55275195363427 40.0 37.0 40.0 37.0 40.0 36-37 38.53037639017496 40.0 37.0 40.0 37.0 40.0 38-39 38.556297665303404 40.0 37.0 40.0 37.0 40.0 40-41 38.537247176683536 40.0 37.0 40.0 37.0 40.0 42-43 38.25194954119675 40.0 37.0 40.0 37.0 40.0 44-45 38.163132664296924 40.0 37.0 40.0 37.0 40.0 46-47 38.203927921166795 40.0 37.0 40.0 37.0 40.0 48-49 38.08023114399165 40.0 37.0 40.0 37.0 40.0 50-51 38.18046719284276 40.0 37.0 40.0 37.0 40.0 52-53 38.17411625163791 40.0 37.0 40.0 37.0 40.0 54-55 38.12831546285787 40.0 37.0 40.0 37.0 40.0 56-57 38.02316425077497 40.0 37.0 40.0 35.0 40.0 58-59 37.90549404140223 40.0 37.0 40.0 33.0 40.0 60-61 37.68076090917665 40.0 37.0 40.0 33.0 40.0 62-63 37.50081635251847 38.5 37.0 40.0 33.0 40.0 64-65 37.341374746466705 37.0 37.0 40.0 33.0 40.0 66-67 37.11834736003616 37.0 37.0 40.0 33.0 40.0 68-69 36.84918384544413 37.0 37.0 40.0 33.0 40.0 70-71 36.409580628959276 37.0 37.0 40.0 33.0 40.0 72-73 36.302365200603035 37.0 37.0 38.5 33.0 40.0 74-75 36.063604608660754 37.0 37.0 37.0 33.0 40.0 76-77 34.03276637928715 35.0 33.0 37.0 30.0 37.0 78-79 35.409357136378745 37.0 33.0 37.0 33.0 37.0 80-81 35.697794161071144 37.0 37.0 37.0 33.0 37.0 82-83 35.68163818294795 37.0 37.0 37.0 33.0 37.0 84-85 35.57129728251197 37.0 37.0 37.0 33.0 37.0 86-87 35.12614068336411 37.0 33.0 37.0 33.0 37.0 88-89 35.053625608138134 37.0 33.0 37.0 33.0 37.0 90-91 35.22365086361877 37.0 33.0 37.0 33.0 37.0 92-93 35.21543460954829 37.0 33.0 37.0 33.0 37.0 94-95 35.18664158905856 37.0 33.0 37.0 33.0 37.0 96-97 35.14682021423319 37.0 33.0 37.0 33.0 37.0 98-99 35.11284170055633 37.0 33.0 37.0 33.0 37.0 100 35.05712882962418 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 0.0 20 18.0 21 148.0 22 583.0 23 1733.0 24 4258.0 25 9114.0 26 16258.0 27 26949.0 28 40618.0 29 58364.0 30 79471.0 31 107671.0 32 144875.0 33 198492.0 34 284299.0 35 438740.0 36 863331.0 37 2461569.0 38 3593460.0 39 145240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.3892639377062 20.79716650700462 14.409772143242048 23.403797412047137 2 14.282022840069835 21.03594573008544 42.523326607429475 22.158704822415253 3 17.50497780856071 26.927988587765476 31.07136599326381 24.495667610410006 4 11.752927024348661 18.42929674713186 40.16666379524176 29.65111243327772 5 12.578278147445893 38.41288710718141 36.167371624310206 12.84146312106249 6 28.69357665365261 39.082779589798136 19.101500107431182 13.12214364911808 7 25.491348692590243 33.36095119013809 23.742291178501777 17.405408938769888 8 23.98214412344356 36.80589928748525 21.548382438016457 17.663574151054732 9 25.28896982051028 16.72973111054816 21.80003452428753 36.18126454465403 10-11 23.62929670156184 27.223155862055293 29.450715753611746 19.69683168277112 12-13 24.658636092417012 24.783471007680888 29.320559425608362 21.23733347429374 14-15 21.84891246724411 26.170825844320007 27.36758325149646 24.61267843693943 16-17 21.045739017388748 29.227942065744106 28.025792450980173 21.70052646588697 18-19 20.868038049398994 28.331171927294164 29.916663844705365 20.884126178601477 20-21 22.099976955733176 27.61321454778783 29.649192630601583 20.63761586587741 22-23 21.588333845177587 27.549428371748203 29.551379575142718 21.310858207931492 24-25 21.292955856290238 27.68457245242242 29.84279199713416 21.17967969415318 26-27 21.298598827680905 27.905499859735123 29.618184234227584 21.17771707835639 28-29 21.098340640057835 27.98355979598116 29.707381274470485 21.210718289490522 30-31 21.67231068866142 27.79454832862605 29.513608526326497 21.01953245638603 32-33 21.496691422263392 27.9100847924932 29.389854232410322 21.20336955283309 34-35 21.40383777173083 28.131961275916407 29.503584843515302 20.960616108837463 36-37 21.526217883785232 27.870072189343254 29.40077457257786 21.202935354293654 38-39 21.223410787631448 28.024688921236258 29.528309521862578 21.22359076926972 40-41 21.519072017375947 27.892830694995634 29.441148794711484 21.14694849291693 42-43 21.580308779502676 27.97094686924766 29.112571761215932 21.336172590033733 44-45 21.600656207501093 28.32882515689392 28.750765697042326 21.319752938562658 46-47 21.690754230301206 27.99918842429455 28.49596268337251 21.81409466203173 48-49 21.71996491500755 28.105882450770125 28.518248028688713 21.655904605533607 50-51 21.432489613342938 28.38059437507538 28.374390845203834 21.812525166377853 52-53 21.58398006766494 28.37231730476101 28.32929728270301 21.71440534487104 54-55 21.769093988161885 28.20736419299265 28.233978630052224 21.789563188793238 56-57 21.860953346718716 28.40844399326653 27.9950494746399 21.735553185374847 58-59 21.572204794354775 28.508332837230533 28.32301569495943 21.59644667345526 60-61 21.79994261912055 28.558117608254296 28.048893438515442 21.593046334109708 62-63 21.682422503941932 28.534426841589912 28.057223424039464 21.72592723042869 64-65 21.557522619643862 28.550815587630574 28.071753304998897 21.81990848772667 66-67 21.77720499532544 28.616724318553487 27.7346339561299 21.871436729991174 68-69 21.75170529426204 28.457570236683143 28.01248032784177 21.77824414121304 70-71 21.733786810789088 28.036368138016275 28.065731814318358 22.164113236876275 72-73 21.841667953188743 28.072368823404048 28.142239265955872 21.94372395745134 74-75 21.653503159961506 28.39711675135702 27.987838081423938 21.96154200725754 76-77 21.781744062524194 28.36573302585672 27.77412540008695 22.078397511532135 78-79 21.89779494758125 28.330832797063604 27.724406199432277 22.04696605592287 80-81 21.70877890835963 28.29480705913871 27.828523489739965 22.167890542761693 82-83 21.890863538302664 28.232457183621683 27.9842623900869 21.89241688798875 84-85 22.20412820292491 28.155818222289607 27.737276208402044 21.902777366383436 86-87 21.72414398271493 28.362446499729604 27.893627922396387 22.01978159515908 88-89 22.022900580616454 28.342217785482227 27.808791567879876 21.826090066021443 90-91 22.02347005308324 28.294074593144742 27.92580118532045 21.75665416845157 92-93 22.006413660094392 28.337869922984925 27.834554279109536 21.821162137811143 94-95 21.75900142592929 28.455974035535046 27.877596448434556 21.907428090101106 96-97 21.81624111673383 28.5529096331884 28.087724960677857 21.54312428939991 98-99 22.819488816528334 30.44594292723725 28.337869567717828 18.396698688516587 100 22.02121496419986 31.438370287981133 22.128726968248966 24.41168777957004 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1784.0 1 1708.5 2 2744.5 3 4111.5 4 6074.5 5 10503.0 6 13847.5 7 15401.0 8 15584.0 9 14373.0 10 12729.0 11 11323.5 12 12536.5 13 17506.0 14 28483.5 15 42759.0 16 54152.0 17 60534.5 18 61394.5 19 57795.0 20 51982.5 21 45955.5 22 42792.5 23 44956.5 24 51246.5 25 62784.5 26 81271.5 27 101872.5 28 117173.0 29 132632.0 30 149036.0 31 164869.5 32 186797.0 33 211597.5 34 237822.0 35 261700.5 36 288033.0 37 312383.0 38 319422.5 39 322912.5 40 333924.0 41 338270.0 42 335933.0 43 340348.5 44 345265.5 45 347442.0 46 348719.0 47 350536.0 48 352186.0 49 344408.0 50 328502.5 51 310812.5 52 292783.0 53 273460.0 54 252076.5 55 230333.5 56 208938.5 57 187924.0 58 166450.0 59 144520.0 60 119283.0 61 92147.5 62 68862.0 63 50262.5 64 36055.0 65 25340.0 66 17803.5 67 12731.0 68 9264.5 69 6560.0 70 4635.5 71 3254.0 72 2205.5 73 1424.0 74 892.0 75 573.5 76 378.0 77 238.0 78 151.0 79 98.0 80 71.5 81 61.0 82 54.5 83 40.5 84 22.0 85 11.0 86 6.0 87 3.5 88 2.5 89 1.5 90 0.5 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 9.203330236845344E-4 4 0.010465838359079256 5 0.010914205729592235 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 2.359883398161297E-5 22-23 0.0 24-25 0.005954404604094353 26-27 0.04600342513888542 28-29 0.08157286132152879 30-31 0.07394964860316706 32-33 0.034014972039574466 34-35 0.0030427958539529306 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 2.0462764131920627E-4 56-57 5.027066564226221E-4 58-59 6.499162875325844E-6 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 2.2645457434465933E-4 72-73 0.013365575996422734 74-75 0.0287596318739171 76-77 0.002615823702789406 78-79 0.0 80-81 0.0 82-83 0.007780660283380067 84-85 0.046205515832003045 86-87 0.03930514717556988 88-89 0.009836565648752921 90-91 1.210528266969904E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 119.0 20-21 552.0 22-23 1314.0 24-25 2387.0 26-27 3888.0 28-29 7308.0 30-31 17061.0 32-33 22408.0 34-35 30360.0 36-37 43243.0 38-39 51209.0 40-41 56854.0 42-43 65187.0 44-45 79888.0 46-47 78555.0 48-49 68401.0 50-51 58800.0 52-53 54222.0 54-55 59226.0 56-57 64910.0 58-59 64112.0 60-61 65467.0 62-63 65958.0 64-65 67964.0 66-67 73157.0 68-69 69352.0 70-71 67128.0 72-73 64462.0 74-75 64344.0 76-77 64424.0 78-79 67820.0 80-81 69737.0 82-83 66104.0 84-85 67473.0 86-87 69179.0 88-89 74293.0 90-91 78927.0 92-93 81613.0 94-95 96492.0 96-97 263820.0 98-99 506240.0 100-101 5601235.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.8852242576362 #Duplication Level Percentage of deduplicated Percentage of total 1 87.72268300626193 70.07746204436765 2 7.773522482876646 12.419791736327557 3 2.2674986659051024 5.4341891828916005 4 0.9460317565471001 3.0229583610644233 5 0.473979252086421 1.8931969423195212 6 0.2603499354314489 1.247886778644144 7 0.15569463269497008 0.8706390453983587 8 0.10256189444306658 0.655454395029791 9 0.0700859499562382 0.5038948646607202 >10 0.22009119758099302 2.6613767325397197 >50 0.004627124694631927 0.25105188074843066 >100 0.002311383506198037 0.3737599878491728 >500 2.6655079091890437E-4 0.1532656149031202 >1k 2.9616722435632373E-4 0.43507243325572936 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1799141329288902E-5 2 0.0 0.0 0.0 1.1799141329288902E-5 1.1799141329288902E-5 3 0.0 0.0 0.0 3.539742398786671E-5 1.1799141329288902E-5 4 0.0 0.0 0.0 3.539742398786671E-5 1.1799141329288902E-5 5 0.0 0.0 0.0 3.539742398786671E-5 1.1799141329288902E-5 6 0.0 0.0 0.0 3.539742398786671E-5 1.1799141329288902E-5 7 0.0 0.0 0.0 3.539742398786671E-5 1.1799141329288902E-5 8 0.0 0.0 0.0 3.539742398786671E-5 4.719656531715561E-5 9 0.0 0.0 0.0 4.719656531715561E-5 5.899570664644451E-5 10-11 0.0 0.0 0.0 8.259398930502232E-5 5.899570664644451E-5 12-13 0.0 0.0 0.0 8.259398930502232E-5 5.899570664644451E-5 14-15 0.0 1.1799141329288902E-5 0.0 1.0029270129895567E-4 7.669441864037787E-5 16-17 0.0 1.1799141329288902E-5 0.0 1.1799141329288902E-4 1.1799141329288902E-4 18-19 0.0 1.1799141329288902E-5 0.0 1.4158969595146683E-4 1.2979055462217793E-4 20-21 0.0 1.1799141329288902E-5 0.0 1.5338883728075573E-4 1.4158969595146683E-4 22-23 0.0 1.1799141329288902E-5 0.0 1.5928840794540017E-4 1.7698711993933353E-4 24-25 0.0 1.1799141329288902E-5 0.0 2.182841145918447E-4 2.0058540259791134E-4 26-27 0.0 1.1799141329288902E-5 0.0 3.2447638655544485E-4 2.1238454392720024E-4 28-29 0.0 1.1799141329288902E-5 0.0 7.728437570684232E-4 2.1238454392720024E-4 30-31 0.0 1.1799141329288902E-5 0.0 0.0023362299831992026 2.1238454392720024E-4 32-33 0.0 1.1799141329288902E-5 0.0 0.005710784403375829 2.3598282658577805E-4 34-35 0.0 1.1799141329288902E-5 0.0 0.009923077857931967 2.47781967915067E-4 36-37 0.0 2.3598282658577805E-5 0.0 0.017970092244506998 2.47781967915067E-4 38-39 0.0 2.3598282658577805E-5 0.0 0.03873658098405547 2.713802505736448E-4 40-41 0.0 2.3598282658577805E-5 0.0 0.059798048256836156 2.8317939190293366E-4 42-43 0.0 2.3598282658577805E-5 0.0 0.07237003334319349 2.8317939190293366E-4 44-45 0.0 2.3598282658577805E-5 0.0 0.08937849556936343 2.8317939190293366E-4 46-47 0.0 2.3598282658577805E-5 0.0 0.10788544874435307 2.8317939190293366E-4 48-49 0.0 2.3598282658577805E-5 0.0 0.12472872299191298 2.8317939190293366E-4 50-51 0.0 2.3598282658577805E-5 0.0 0.14084045047705698 2.8317939190293366E-4 52-53 0.0 2.3598282658577805E-5 0.0 0.18634383901345963 2.890789625675781E-4 54-55 0.0 2.3598282658577805E-5 0.0 0.24482038344141543 2.949785332322226E-4 56-57 0.0 2.3598282658577805E-5 0.0 0.30569215355921686 3.00878103896867E-4 58-59 0.0 2.3598282658577805E-5 0.0 0.35136073007422963 3.0677767456151146E-4 60-61 0.0 2.3598282658577805E-5 0.0 0.38466970604681217 3.0677767456151146E-4 62-63 0.0 2.3598282658577805E-5 0.0 0.40891694147850083 3.185768158908004E-4 64-65 0.0 2.3598282658577805E-5 0.0 0.4164506932172518 3.185768158908004E-4 66-67 0.0 2.3598282658577805E-5 0.0 0.42268653940978096 3.2447638655544485E-4 68-69 0.0 2.3598282658577805E-5 0.0 0.4295418405220979 3.3037595722008926E-4 70-71 0.0 2.3598282658577805E-5 0.0 0.43487505240293645 3.3037595722008926E-4 72-73 0.0 2.3598282658577805E-5 0.0 0.43892215787888256 3.5397423987866707E-4 74-75 0.0 2.3598282658577805E-5 0.0 0.4422082187390895 3.5397423987866707E-4 76-77 0.0 2.3598282658577805E-5 0.0 0.44486302553817947 3.5397423987866707E-4 78-79 0.0 2.3598282658577805E-5 0.0 0.44689837741748184 3.5397423987866707E-4 80-81 0.0 2.3598282658577805E-5 0.0 0.44760632589723914 3.6577338120795594E-4 82-83 0.0 2.3598282658577805E-5 0.0 0.44809009069174 3.775725225372449E-4 84-85 0.0 2.3598282658577805E-5 0.0 0.4483201739476611 3.775725225372449E-4 86-87 0.0 2.3598282658577805E-5 0.0 0.44838506922497223 3.893716638665338E-4 88 0.0 2.3598282658577805E-5 0.0 0.44840276793696615 3.893716638665338E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12975 0.0 48.671658 1 GTATCAA 22820 0.0 37.42775 1 ATCAACG 28490 0.0 29.365337 3 CAACGCA 28920 0.0 28.911411 5 TCAACGC 29000 0.0 28.819336 4 AACGCAG 29225 0.0 28.767792 6 TATCAAC 29710 0.0 28.503948 2 ACGCAGA 32660 0.0 25.63772 7 CGCAGAG 33120 0.0 25.268768 8 GCAGAGT 38020 0.0 21.787872 9 TACATGG 26790 0.0 20.309835 2 GAGTACT 23925 0.0 20.011606 12-13 ACATGGG 26870 0.0 19.773285 3 GTACATG 29150 0.0 19.30918 1 AGAGTAC 35880 0.0 19.047379 10-11 CAGAGTA 38000 0.0 19.044973 10-11 CATGGGG 18215 0.0 17.791409 4 GTACTTT 27200 0.0 17.461723 14-15 AGTACTT 26565 0.0 16.947601 12-13 GTGGTAT 6620 0.0 16.747261 1 >>END_MODULE