##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138650_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8061775 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.7807067302176 33.0 33.0 33.0 33.0 33.0 2 32.77717723454202 33.0 33.0 33.0 33.0 33.0 3 32.77874041386667 33.0 33.0 33.0 33.0 33.0 4 36.72030005798971 37.0 37.0 37.0 37.0 37.0 5 36.735130414828 37.0 37.0 37.0 37.0 37.0 6 36.74370346480769 37.0 37.0 37.0 37.0 37.0 7 36.73168489569605 37.0 37.0 37.0 37.0 37.0 8 36.72481047908184 37.0 37.0 37.0 37.0 37.0 9 36.722716647388445 37.0 37.0 37.0 37.0 37.0 10-11 36.69448489941731 37.0 37.0 37.0 37.0 37.0 12-13 36.673716644287396 37.0 37.0 37.0 37.0 37.0 14-15 38.919952988020626 40.0 40.0 40.0 37.0 40.0 16-17 38.87288841477218 40.0 37.0 40.0 37.0 40.0 18-19 38.89754086413972 40.0 40.0 40.0 37.0 40.0 20-21 38.93297991143645 40.0 40.0 40.0 37.0 40.0 22-23 38.95885609539488 40.0 40.0 40.0 37.0 40.0 24-25 38.96818380694485 40.0 40.0 40.0 37.0 40.0 26-27 38.87920760415955 40.0 40.0 40.0 37.0 40.0 28-29 38.80842034430075 40.0 38.5 40.0 37.0 40.0 30-31 38.74933418339971 40.0 37.0 40.0 37.0 40.0 32-33 38.438203156932104 40.0 37.0 40.0 37.0 40.0 34-35 38.57816250332619 40.0 37.0 40.0 37.0 40.0 36-37 38.55167486009395 40.0 37.0 40.0 37.0 40.0 38-39 38.5872370922813 40.0 37.0 40.0 37.0 40.0 40-41 38.55450995272599 40.0 37.0 40.0 37.0 40.0 42-43 38.26518501489625 40.0 37.0 40.0 37.0 40.0 44-45 38.174640817685166 40.0 37.0 40.0 37.0 40.0 46-47 38.20682115767289 40.0 37.0 40.0 37.0 40.0 48-49 38.08002410750756 40.0 37.0 40.0 37.0 40.0 50-51 38.19331284255395 40.0 37.0 40.0 37.0 40.0 52-53 38.185216730720576 40.0 37.0 40.0 37.0 40.0 54-55 38.134566211424115 40.0 37.0 40.0 37.0 40.0 56-57 38.029424976701875 40.0 37.0 40.0 35.0 40.0 58-59 37.90841560026912 40.0 37.0 40.0 33.0 40.0 60-61 37.67470362382317 40.0 37.0 40.0 33.0 40.0 62-63 37.49138418919331 38.5 37.0 40.0 33.0 40.0 64-65 37.32486241953724 37.0 37.0 40.0 33.0 40.0 66-67 37.094092599429246 37.0 37.0 40.0 33.0 40.0 68-69 36.82205258649941 37.0 37.0 40.0 33.0 40.0 70-71 36.367807596657194 37.0 37.0 40.0 33.0 40.0 72-73 36.257440559384264 37.0 37.0 37.0 33.0 40.0 74-75 36.01710335606084 37.0 37.0 37.0 33.0 40.0 76-77 33.97944888373662 35.0 33.0 37.0 27.0 37.0 78-79 35.37360658948607 37.0 33.0 37.0 33.0 37.0 80-81 35.66907620985529 37.0 37.0 37.0 33.0 37.0 82-83 35.658754970726996 37.0 37.0 37.0 33.0 37.0 84-85 35.545162017859525 37.0 37.0 37.0 33.0 37.0 86-87 35.10907516704903 37.0 33.0 37.0 33.0 37.0 88-89 35.03321009428373 37.0 33.0 37.0 33.0 37.0 90-91 35.19529205825694 37.0 33.0 37.0 33.0 37.0 92-93 35.18493275535161 37.0 33.0 37.0 33.0 37.0 94-95 35.15318920320965 37.0 33.0 37.0 33.0 37.0 96-97 35.11143632066681 37.0 33.0 37.0 33.0 37.0 98-99 35.07325457012283 37.0 33.0 37.0 33.0 37.0 100 35.015638531139 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 4.0 20 24.0 21 139.0 22 536.0 23 1656.0 24 3854.0 25 8234.0 26 15264.0 27 25150.0 28 38021.0 29 54706.0 30 75989.0 31 103227.0 32 139759.0 33 192082.0 34 275299.0 35 425015.0 36 829887.0 37 2331667.0 38 3406489.0 39 134771.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.63533465024762 20.359002825060237 14.551844972106018 23.453817552586123 2 14.463080401028309 20.99249855025723 42.04407838224212 22.500342666472335 3 17.993031469530322 26.212183553508943 30.55347954536969 25.241305431591044 4 12.23981952376256 18.202978701496548 39.40569874685131 30.151503027889582 5 13.19655315335902 37.82611613686305 35.7016788744863 13.275651835291633 6 29.50255992011685 38.16026867532275 19.007290578067483 13.329880826492923 7 26.12558648684688 32.92535452800407 23.324069451206462 17.624989533942585 8 24.0833935454661 36.78839957701623 21.327747301307713 17.800459576209953 9 25.346403242462113 17.00556018990855 21.61506616098812 36.03297040664122 10-11 23.850504386440953 27.036893240012276 29.099404287517327 20.01319808602944 12-13 24.756334678157106 24.634909805843005 29.19215681410111 21.416598701898774 14-15 21.89308806063181 26.074270244456088 27.105519566100515 24.927122128811583 16-17 21.328038800388253 29.159223620108477 27.727894911480412 21.78484266802286 18-19 21.233959022671804 28.270387104576844 29.625876435400393 20.869777437350955 20-21 22.13545257195105 27.42329677657882 29.572095376653778 20.869155274816354 22-23 21.83189597155372 27.34208466025526 29.40931644648788 21.41670292170314 24-25 21.57186800860155 27.471928934199113 29.507631830708736 21.4485712264906 26-27 21.516288073748786 27.667734346915573 29.38001076579309 21.43596681354255 28-29 21.419473737944983 27.767071458935533 29.414232381587745 21.399222421531743 30-31 21.775034876491066 27.563269699339394 29.316200581063367 21.345494843106174 32-33 21.608545562621437 27.659141672009536 29.139759978772656 21.59255278659637 34-35 21.702215532682235 27.801118594104253 29.16707151094378 21.32959436226973 36-37 21.715999617186807 27.73564304813312 29.118308141179348 21.430049193500725 38-39 21.515875524628647 27.875181690052298 29.179690123103867 21.429252662215184 40-41 21.79348872243908 27.770107490608844 29.009348513616622 21.42705527333545 42-43 21.805159765686305 27.81879849663655 28.740694930309346 21.6353468073678 44-45 21.889671561410363 27.934707556797928 28.565379628594727 21.610241253196985 46-47 21.851312036553242 27.977299248522915 28.322846138399843 21.848542576524007 48-49 21.866734915205182 28.081545489201424 28.248928431868798 21.802791163724596 50-51 21.838831821654512 28.22378815381439 28.116909608612627 21.820470415918475 52-53 21.955656830624307 28.123018675559287 28.007418184907685 21.913906308908725 54-55 21.974051427937216 28.04935212094286 28.074583184631983 21.902013266487945 56-57 21.92732419454234 28.11227747238197 28.075108637914646 21.885289695161045 58-59 21.94410300983637 28.15892621548216 28.038843526351247 21.858127248330227 60-61 22.05340711767899 28.146101366213657 27.987001479849603 21.81349003625775 62-63 21.920271103574336 28.180078236835733 28.003838890479443 21.89581176911049 64-65 21.902702564762937 28.16717264040208 27.974130814233888 21.955993980601093 66-67 22.001258519492545 28.18501313154143 27.811602945699033 22.00212540326699 68-69 21.97980114475832 28.20177787886849 27.826683074009097 21.991737902364093 70-71 21.94969394351663 27.959018940867487 27.88344891200067 22.207838203615214 72-73 21.97082501111363 27.993683828893225 27.894918333029533 22.140572826963613 74-75 21.891200078949467 28.131659236092986 27.82505718084558 22.152083504111964 76-77 22.03866795683387 28.058306141970142 27.641353263226208 22.261672637969784 78-79 22.02431452389209 28.10858285383909 27.65554836616738 22.211554256101447 80-81 21.952010135280684 28.103981704677434 27.719095371529406 22.224912788512476 82-83 21.99092570796455 28.12752330287073 27.78992562517922 22.0916253639855 84-85 22.149509404239915 28.06871232599609 27.717301527241716 22.06447674252228 86-87 22.03041283248274 28.077482814949224 27.774360161005156 22.11774419156288 88-89 22.091511005087234 28.088050575579427 27.720485083659714 22.09995333567362 90-91 22.051826803243692 28.0887583222822 27.778042107210666 22.081372767263446 92-93 22.0268832825883 28.056589026623964 27.81356039042683 22.10296730036091 94-95 21.88536982403575 28.169595036800892 27.842801776259783 22.102233362903576 96-97 21.99365351476062 28.269371052252783 27.95012755589567 21.786847877090928 98-99 23.06648181336897 30.164211424331494 28.17020487340139 18.599101888898147 100 21.99030625863621 31.197223664724984 22.01664894829114 24.795821128347665 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1911.0 1 1711.0 2 2288.5 3 3312.5 4 4721.0 5 7726.0 6 10164.5 7 11695.0 8 12548.0 9 12350.0 10 11407.0 11 10605.0 12 11786.5 13 15706.0 14 24379.0 15 35576.0 16 44610.0 17 50307.5 18 51757.0 19 49077.0 20 44653.0 21 40408.0 22 38185.5 23 40154.5 24 46770.5 25 57396.5 26 71553.0 27 87456.0 28 103857.5 29 122078.5 30 139621.5 31 156586.5 32 175568.5 33 194038.0 34 212830.0 35 230935.0 36 250427.0 37 269230.5 38 281269.0 39 291279.0 40 302759.5 41 311301.0 42 316852.0 43 323182.0 44 328853.0 45 333770.5 46 335735.5 47 335066.0 48 332046.5 49 324721.5 50 314656.0 51 301334.5 52 285045.5 53 266998.0 54 249548.5 55 231049.5 56 209808.0 57 187278.0 58 164358.0 59 141301.0 60 117193.0 61 94770.0 62 75185.5 63 58330.0 64 43854.5 65 32289.0 66 23988.5 67 18009.0 68 13442.5 69 9593.0 70 6636.5 71 4596.0 72 3141.0 73 2105.5 74 1412.5 75 892.5 76 573.5 77 377.5 78 251.5 79 168.5 80 117.5 81 87.5 82 67.5 83 55.0 84 48.0 85 42.0 86 33.0 87 23.5 88 15.5 89 8.0 90 4.0 91 3.5 92 2.5 93 2.0 94 1.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0012900384840807391 4 0.010915710249913946 5 0.0118832391129745 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 1.2404523160516204E-5 22-23 0.0 24-25 0.005577297087974696 26-27 0.04495521668550971 28-29 0.0808466414774005 30-31 0.07285349312329781 32-33 0.03332015682022817 34-35 0.002922286656839125 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 1.4032086704931945E-4 56-57 3.634093368068985E-4 58-59 1.3558705227714726E-5 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 1.9913011431917628E-4 72-73 0.012688407429137861 74-75 0.0285560387306103 76-77 0.002429217667167562 78-79 0.0 80-81 0.0 82-83 0.00734815781683532 84-85 0.04538767949245708 86-87 0.03811842562193764 88-89 0.009645242576693374 90-91 9.35985312518476E-5 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 121.0 20-21 478.0 22-23 1077.0 24-25 2476.0 26-27 3366.0 28-29 6535.0 30-31 15214.0 32-33 19056.0 34-35 27008.0 36-37 38322.0 38-39 45052.0 40-41 48999.0 42-43 57484.0 44-45 70003.0 46-47 68248.0 48-49 60705.0 50-51 52558.0 52-53 49208.0 54-55 52644.0 56-57 54353.0 58-59 55680.0 60-61 54578.0 62-63 54184.0 64-65 57364.0 66-67 60298.0 68-69 60939.0 70-71 60385.0 72-73 58264.0 74-75 58635.0 76-77 59206.0 78-79 62083.0 80-81 63526.0 82-83 61085.0 84-85 61565.0 86-87 64308.0 88-89 68431.0 90-91 71944.0 92-93 76612.0 94-95 92284.0 96-97 261624.0 98-99 497422.0 100-101 5428451.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.37873518651486 #Duplication Level Percentage of deduplicated Percentage of total 1 89.81448994011649 76.68247552509109 2 7.112990526307342 12.14596269059567 3 1.7405156333151526 4.458090700344108 4 0.638574414709717 2.180827034015386 5 0.28063970626556284 1.1980331582034403 6 0.14705160001164794 0.7533047769688677 7 0.07832970321674282 0.46813836917264107 8 0.05022788008984329 0.34307142985366024 9 0.03433038857902458 0.2637976639804825 >10 0.10069768097922842 1.2847920910290545 >50 0.0016507295791578869 0.09160871701903546 >100 4.564971770982522E-4 0.08507204597970325 >500 2.2649826556330083E-5 0.01840990493481875 >1k 2.2649826390800204E-5 0.026415892812159506 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 3.721264857925209E-5 0.0 0.0 0.0 3 0.0 3.721264857925209E-5 0.0 0.0 0.0 4 0.0 6.202108096542014E-5 0.0 0.0 0.0 5 0.0 6.202108096542014E-5 0.0 0.0 0.0 6 0.0 6.202108096542014E-5 0.0 0.0 0.0 7 0.0 6.202108096542014E-5 0.0 0.0 0.0 8 0.0 7.442529715850418E-5 0.0 0.0 0.0 9 0.0 1.1163794573775626E-4 0.0 0.0 0.0 10-11 0.0 1.1163794573775626E-4 0.0 6.202108096542015E-6 0.0 12-13 0.0 1.1163794573775626E-4 0.0 1.240421619308403E-5 0.0 14-15 0.0 1.6125481051009236E-4 0.0 1.240421619308403E-5 0.0 16-17 0.0 1.736590267031764E-4 0.0 1.8606324289626044E-5 0.0 18-19 0.0 1.8606324289626043E-4 0.0 2.480843238616806E-5 0.0 20-21 0.0 1.9846745908934447E-4 0.0 2.480843238616806E-5 0.0 22-23 1.240421619308403E-5 1.9846745908934447E-4 0.0 4.34147566757941E-5 6.202108096542015E-6 24-25 1.240421619308403E-5 2.046695671858865E-4 0.0 8.68295133515882E-5 1.240421619308403E-5 26-27 1.240421619308403E-5 2.108716752824285E-4 0.0 1.4264848622046633E-4 1.240421619308403E-5 28-29 1.240421619308403E-5 2.108716752824285E-4 0.0 4.4655178295102503E-4 1.240421619308403E-5 30-31 1.240421619308403E-5 2.3568010766859655E-4 0.0 0.0011846026464395248 1.240421619308403E-5 32-33 1.240421619308403E-5 2.3568010766859655E-4 0.0 0.0030328308592090453 2.480843238616806E-5 34-35 1.240421619308403E-5 3.039032967305587E-4 0.0 0.0056191099354670655 2.480843238616806E-5 36-37 1.240421619308403E-5 3.7212648579252087E-4 0.0 0.009824139224922552 3.721264857925209E-5 38-39 1.240421619308403E-5 3.9693491817868894E-4 0.0 0.02182521839173135 3.721264857925209E-5 40-41 1.240421619308403E-5 4.27945458661399E-4 0.0 0.03432866831436005 3.721264857925209E-5 42-43 1.240421619308403E-5 4.7756232343373515E-4 0.0 0.04185182543546552 4.34147566757941E-5 44-45 1.240421619308403E-5 5.829981610749493E-4 0.0 0.05353039498125413 4.961686477233612E-5 46-47 1.240421619308403E-5 6.450192420403696E-4 0.0 0.0650104970679534 4.961686477233612E-5 48-49 1.240421619308403E-5 6.512213501369115E-4 0.0 0.0752253691029581 6.202108096542014E-5 50-51 1.240421619308403E-5 7.132424311023317E-4 0.0 0.08610386670429279 6.202108096542014E-5 52-53 1.240421619308403E-5 7.194445391988737E-4 0.0 0.11730667253799566 6.822318906196216E-5 54-55 1.240421619308403E-5 7.256466472954158E-4 0.0 0.15628692192476223 7.442529715850418E-5 56-57 1.240421619308403E-5 7.566571877781258E-4 0.0 0.1986039054674684 7.442529715850418E-5 58-59 1.240421619308403E-5 7.752635120677518E-4 0.0 0.2377392075566485 7.442529715850418E-5 60-61 1.240421619308403E-5 8.062740525504619E-4 0.0 0.25219632152968796 7.442529715850418E-5 62-63 1.240421619308403E-5 8.310824849366299E-4 0.0 0.2728431393830763 7.442529715850418E-5 64-65 1.240421619308403E-5 9.365183225778442E-4 0.0 0.2792561191549008 7.442529715850418E-5 66-67 1.240421619308403E-5 9.551246468674703E-4 0.0 0.2847139742798577 7.442529715850418E-5 68-69 1.240421619308403E-5 9.613267549640123E-4 0.0 0.2898245113514083 7.442529715850418E-5 70-71 1.240421619308403E-5 9.675288630605543E-4 0.0 0.29458152826145606 7.442529715850418E-5 72-73 1.240421619308403E-5 9.675288630605543E-4 0.0 0.2982779846869951 7.442529715850418E-5 74-75 1.240421619308403E-5 0.0010109436197363484 0.0 0.301286007113818 7.442529715850418E-5 76-77 1.240421619308403E-5 0.0010481562683156004 0.0 0.30410176418964807 7.442529715850418E-5 78-79 1.240421619308403E-5 0.0010605604845086846 0.0 0.3063221188882101 7.442529715850418E-5 80-81 1.240421619308403E-5 0.0010667625926052266 0.0 0.30693612758976774 8.062740525504618E-5 82-83 1.240421619308403E-5 0.0010667625926052266 0.0 0.3073950835889119 1.1163794573775626E-4 84-85 1.240421619308403E-5 0.0010791668087983106 0.0 0.3075749447237116 1.2404216193084028E-4 86-87 1.240421619308403E-5 0.0011039752411844785 0.0 0.3076617742370632 1.2404216193084028E-4 88 1.240421619308403E-5 0.0011411878897637307 0.0 0.3076741784532563 1.2404216193084028E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11410 0.0 50.038425 1 GTATCAA 20200 0.0 36.19699 1 TCAACGC 24065 0.0 30.007881 4 ATCAACG 24055 0.0 29.949667 3 CAACGCA 24535 0.0 29.361002 5 TATCAAC 25180 0.0 28.850422 2 AACGCAG 25165 0.0 28.724989 6 ACGCAGA 28440 0.0 25.40207 7 CGCAGAG 28830 0.0 25.028645 8 TGGTATC 5360 0.0 22.441792 2 GTGGTAT 5780 0.0 22.074602 1 GCAGAGT 33620 0.0 21.245512 9 GAGTACT 21055 0.0 20.164808 12-13 GTACATG 23045 0.0 19.90943 1 TACATGG 23220 0.0 19.296846 2 CAGAGTA 33130 0.0 19.284492 10-11 AGAGTAC 30815 0.0 18.69129 10-11 ACATGGG 23650 0.0 18.419214 3 GTACTTT 23330 0.0 18.05168 14-15 AGTACTT 22685 0.0 16.955067 12-13 >>END_MODULE