##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138636_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7477048 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.81174335111932 33.0 33.0 33.0 33.0 33.0 2 32.81349912425331 33.0 33.0 33.0 33.0 33.0 3 32.81198876882962 33.0 33.0 33.0 33.0 33.0 4 36.75736226382391 37.0 37.0 37.0 37.0 37.0 5 36.77094931047654 37.0 37.0 37.0 37.0 37.0 6 36.77626290482554 37.0 37.0 37.0 37.0 37.0 7 36.76012739252175 37.0 37.0 37.0 37.0 37.0 8 36.7597904948584 37.0 37.0 37.0 37.0 37.0 9 36.76097170969078 37.0 37.0 37.0 37.0 37.0 10-11 36.73660273412716 37.0 37.0 37.0 37.0 37.0 12-13 36.71840631489861 37.0 37.0 37.0 37.0 37.0 14-15 39.02866512292017 40.0 40.0 40.0 37.0 40.0 16-17 38.969761863238006 40.0 40.0 40.0 37.0 40.0 18-19 38.99908613666784 40.0 40.0 40.0 37.0 40.0 20-21 39.01773412776683 40.0 40.0 40.0 37.0 40.0 22-23 39.050957967966056 40.0 40.0 40.0 37.0 40.0 24-25 39.05617107027122 40.0 40.0 40.0 37.0 40.0 26-27 38.96131920494504 40.0 40.0 40.0 37.0 40.0 28-29 38.87339877525845 40.0 40.0 40.0 37.0 40.0 30-31 38.79874038277303 40.0 38.5 40.0 37.0 40.0 32-33 38.76439694246611 40.0 37.0 40.0 37.0 40.0 34-35 38.72145132519195 40.0 37.0 40.0 37.0 40.0 36-37 38.67375198410643 40.0 37.0 40.0 37.0 40.0 38-39 38.60811218801474 40.0 37.0 40.0 37.0 40.0 40-41 38.58922211530207 40.0 37.0 40.0 37.0 40.0 42-43 38.53797769543215 40.0 37.0 40.0 37.0 40.0 44-45 38.441259376041096 40.0 37.0 40.0 37.0 40.0 46-47 38.34847022196627 40.0 37.0 40.0 37.0 40.0 48-49 38.30990045619649 40.0 37.0 40.0 37.0 40.0 50-51 38.20316004370711 40.0 37.0 40.0 37.0 40.0 52-53 38.155519302148996 40.0 37.0 40.0 37.0 40.0 54-55 38.09391019246762 40.0 37.0 40.0 37.0 40.0 56-57 37.951594981455344 40.0 37.0 40.0 33.0 40.0 58-59 37.85407208549977 40.0 37.0 40.0 33.0 40.0 60-61 37.671530912463936 40.0 37.0 40.0 33.0 40.0 62-63 37.50639929076846 37.0 37.0 40.0 33.0 40.0 64-65 37.30133821432316 37.0 37.0 40.0 33.0 40.0 66-67 37.082025459961855 37.0 37.0 40.0 33.0 40.0 68-69 36.848683185045644 37.0 37.0 40.0 33.0 40.0 70-71 36.587326876114545 37.0 37.0 40.0 33.0 40.0 72-73 36.34107662173219 37.0 37.0 37.0 33.0 40.0 74-75 36.104724789326305 37.0 37.0 37.0 33.0 40.0 76-77 34.50636006725469 35.0 33.0 37.0 30.0 37.0 78-79 35.736262233894905 37.0 35.0 37.0 33.0 37.0 80-81 35.8536196183604 37.0 37.0 37.0 33.0 37.0 82-83 35.78753227273583 37.0 37.0 37.0 33.0 37.0 84-85 35.666759401034554 37.0 37.0 37.0 33.0 37.0 86-87 35.55949033571804 37.0 37.0 37.0 33.0 37.0 88-89 35.48655240767691 37.0 35.0 37.0 33.0 37.0 90-91 35.42158073214937 37.0 33.0 37.0 33.0 37.0 92-93 35.35314360809467 37.0 33.0 37.0 33.0 37.0 94-95 35.30975228969371 37.0 33.0 37.0 33.0 37.0 96-97 35.27829094609274 37.0 33.0 37.0 33.0 37.0 98-99 35.23754666687691 37.0 33.0 37.0 33.0 37.0 100 35.178152741822686 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 10.0 20 32.0 21 141.0 22 586.0 23 1692.0 24 4114.0 25 7957.0 26 13844.0 27 21944.0 28 32674.0 29 46473.0 30 62663.0 31 84653.0 32 114185.0 33 155671.0 34 223939.0 35 347799.0 36 688637.0 37 2119939.0 38 3402706.0 39 147388.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.055667958798715 19.988276121806358 14.37515179787531 24.580904121519616 2 14.400910626760721 20.225990257117516 42.23546511938937 23.1376339967324 3 18.199043322011818 25.53501009440391 30.792940671386525 25.473005912197742 4 12.284621330669232 18.188588764361754 37.177210379667834 32.34957952530118 5 13.393685774036973 37.20503644180908 35.32276476727297 14.078513016880972 6 30.23875197805337 37.02204399383286 18.261150657318236 14.478053370795532 7 26.388395527218762 32.60366925556717 21.665381845883562 19.342553371330503 8 24.54828429615538 36.46425701694038 21.01298533859887 17.974473348305374 9 24.81641150357735 16.96797987655021 20.35133384191194 37.864274777960496 10-11 24.170748937281132 26.464762564049344 28.224929143159173 21.139559355510357 12-13 25.075263660203866 23.82831432939845 28.237454139655117 22.85896787074257 14-15 22.322191859675105 25.520131741831804 25.559625937937003 26.598050460556088 16-17 22.175262215783555 29.06702618466539 26.199477387332543 22.55823421221851 18-19 22.096982659466676 27.456972323836894 28.294348250807005 22.151696765889426 20-21 22.586159578284104 27.00007168763664 28.080201078470946 22.333567655608313 22-23 22.62095226579621 27.28918818368144 27.916884212626965 22.172975337895384 24-25 22.62649408206743 27.380700027311526 28.147723862054775 21.845082028566267 26-27 22.374355105114955 27.918396181328013 28.240539065054026 21.466709648503002 28-29 21.8379274226446 27.05145313916333 28.835118007754435 22.275501430437632 30-31 22.255295646715535 27.637182550364024 28.19946133093018 21.908060471990254 32-33 23.071317578149607 26.94876090576317 28.425734585771767 21.55418693031546 34-35 22.265268074667244 27.077741933330497 28.663365932727952 21.993624059274307 36-37 21.99819631060577 27.603241709687293 28.243000068955826 22.155561910751107 38-39 22.050679996618424 26.711792971232068 28.706854235014028 22.53067279713548 40-41 22.07625066294104 26.612459687177648 28.91949793265377 22.39179171722754 42-43 22.402295007024932 26.515395199531927 29.0050324308754 22.077277362567745 44-45 21.939377355071795 27.0793199099314 28.621262906998723 22.360039827998083 46-47 22.76791776429535 26.517116453955193 27.72229002427555 22.992675757473897 48-49 22.365323351578425 26.608463159649983 28.147954124865176 22.878259363906416 50-51 22.10833007040534 27.16169607391732 28.188677098134452 22.541296757542888 52-53 22.20167141329607 27.449190623875026 28.43227877696203 21.91685918586688 54-55 22.073493698007677 27.534909240386803 27.787862543856455 22.603734517749064 56-57 22.63670026964834 28.018913856546142 27.100984799427952 22.24340107437757 58-59 21.907234627670547 28.42656537882035 27.970023990208443 21.69617600330066 60-61 22.5035159089406 28.833699696531077 26.889176315472383 21.773608079055933 62-63 21.990974062288426 29.224786701702605 26.88717745915706 21.897061776851913 64-65 22.124355572732025 28.794022960314926 27.01896028271808 22.062661184234976 66-67 22.301429605508375 28.372321919871553 27.053466751136156 22.27278172348392 68-69 22.401325855498115 27.88085547698155 27.30271172412495 22.415106943395376 70-71 22.471444316538136 27.52029514228601 27.41304511109743 22.595215430078426 72-73 22.49761945249481 27.53206775791664 27.39650931103308 22.573803478555472 74-75 22.358740762703647 27.6842327553376 27.35046192019593 22.606564561762823 76-77 22.48737669118658 27.684703479992418 27.235587846039866 22.59233198278114 78-79 22.481680229027095 27.69259276919247 27.195848545704166 22.629878456076266 80-81 22.456879047364446 27.693223253535344 27.224255257121378 22.625642441978837 82-83 22.518668079106263 27.62759092083373 27.346164175248628 22.50757682481138 84-85 22.638814221197716 27.616113094370938 27.252069960296126 22.49300272413522 86-87 22.436483658487123 27.618387643643977 27.349163792941123 22.59596490492778 88-89 22.54127789944326 27.651122988466465 27.284645524039377 22.5229535880509 90-91 22.567455863240887 27.666984131033416 27.27812571305473 22.487434292670965 92-93 22.5381872164712 27.65812994964515 27.315881823561373 22.487801010322272 94-95 22.440921636885065 27.746612526710752 27.319884443947036 22.49258139245715 96-97 22.532812899110716 27.80804149496447 27.40074554804684 22.258400057877974 98-99 23.64193242614782 29.6933092089906 27.605675623704183 19.059082741157397 100 22.490624969955174 30.785065496670722 21.44585933212081 25.278450201253293 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2051.0 1 1768.5 2 2009.0 3 2724.5 4 3677.5 5 5809.0 6 7678.0 7 9137.5 8 10241.0 9 10402.0 10 9953.0 11 9412.5 12 10360.5 13 13661.5 14 20787.0 15 30224.5 16 38212.5 17 43031.0 18 43830.5 19 41413.0 20 37365.0 21 33118.5 22 30809.0 23 32064.5 24 36846.0 25 44891.0 26 56695.5 27 70229.5 28 83143.5 29 96957.5 30 110838.0 31 124407.0 32 140178.5 33 157149.5 34 174001.0 35 189681.0 36 206825.0 37 222885.5 38 233226.5 39 242398.5 40 254452.5 41 265738.5 42 274019.0 43 283214.0 44 295091.5 45 314970.5 46 348327.0 47 374888.5 48 370287.5 49 355712.5 50 344227.5 51 325060.0 52 302438.5 53 280571.0 54 262032.5 55 244595.0 56 225462.0 57 205120.5 58 184846.5 59 162657.0 60 136968.5 61 111702.0 62 88690.0 63 68843.0 64 51882.5 65 38293.5 66 28607.5 67 21838.5 68 16410.0 69 11800.5 70 8419.0 71 5910.0 72 3949.0 73 2567.0 74 1713.0 75 1133.5 76 730.0 77 462.5 78 314.0 79 211.0 80 139.5 81 94.5 82 68.5 83 48.0 84 32.0 85 19.0 86 10.5 87 6.5 88 4.5 89 3.5 90 3.0 91 3.5 92 3.0 93 2.0 94 1.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0017787768648803645 4 0.011434994131373772 5 0.017306295211693173 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 6.687279089914814E-6 22-23 0.0 24-25 0.004220633587333872 26-27 0.0424394855956987 28-29 0.08841618146666425 30-31 0.08502726449780555 32-33 0.035733852492377406 34-35 0.0031420874181312605 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 8.750683191359575E-5 56-57 2.2847754430566522E-4 58-59 1.4921601532508164E-5 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 8.059063912325766E-6 72-73 0.012595451814062183 74-75 0.025762704413033976 76-77 0.004824251603836099 78-79 0.0 80-81 0.0 82-83 0.0063751495479006095 84-85 0.04274106389595751 86-87 0.04029877997742193 88-89 0.0114700011277228 90-91 1.6829834868317613E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 97.0 20-21 383.0 22-23 875.0 24-25 2003.0 26-27 3553.0 28-29 7125.0 30-31 18217.0 32-33 22571.0 34-35 30171.0 36-37 45207.0 38-39 51300.0 40-41 51849.0 42-43 60274.0 44-45 70416.0 46-47 68628.0 48-49 61819.0 50-51 55092.0 52-53 55105.0 54-55 68135.0 56-57 81728.0 58-59 79299.0 60-61 79323.0 62-63 82656.0 64-65 89484.0 66-67 104387.0 68-69 68624.0 70-71 56547.0 72-73 52883.0 74-75 53727.0 76-77 53904.0 78-79 56680.0 80-81 56731.0 82-83 54774.0 84-85 54942.0 86-87 57370.0 88-89 60709.0 90-91 63588.0 92-93 65800.0 94-95 78918.0 96-97 229721.0 98-99 437915.0 100-101 4784518.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.27138366933899 #Duplication Level Percentage of deduplicated Percentage of total 1 90.2127141458926 77.82775673932704 2 7.04858319896567 12.161820509664482 3 1.5985658178547593 4.137314549785158 4 0.5458494106227351 1.8836473571806616 5 0.23807914800495455 1.0269708760602387 6 0.12291920613765321 0.6362645995819229 7 0.07200272957968151 0.43482425761658566 8 0.0420154749362352 0.2899786526618754 9 0.02787718928546119 0.21645033232219274 >10 0.08924814894978153 1.160373905823848 >50 0.0015774822565652442 0.0886677988692474 >100 4.5012699699372057E-4 0.06677331428048404 >500 9.433656454263197E-5 0.04647109150774631 >1k 2.358395242318109E-5 0.022686015318527576 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.6748524283915258E-5 2 0.0 0.0 0.0 1.3374262141957629E-5 2.6748524283915258E-5 3 0.0 0.0 0.0 1.3374262141957629E-5 2.6748524283915258E-5 4 0.0 4.012278642587288E-5 0.0 2.6748524283915258E-5 5.3497048567830516E-5 5 1.3374262141957629E-5 4.012278642587288E-5 0.0 2.6748524283915258E-5 5.3497048567830516E-5 6 1.3374262141957629E-5 4.012278642587288E-5 0.0 2.6748524283915258E-5 8.024557285174576E-5 7 1.3374262141957629E-5 4.012278642587288E-5 0.0 4.012278642587288E-5 8.024557285174576E-5 8 1.3374262141957629E-5 5.3497048567830516E-5 0.0 6.687131070978814E-5 8.024557285174576E-5 9 1.3374262141957629E-5 1.2036835927761865E-4 0.0 1.3374262141957629E-4 1.0699409713566103E-4 10-11 2.6748524283915258E-5 1.2036835927761865E-4 0.0 1.6049114570349153E-4 1.0699409713566103E-4 12-13 2.6748524283915258E-5 1.2036835927761865E-4 0.0 2.0061393212936443E-4 1.0699409713566103E-4 14-15 2.6748524283915258E-5 1.2705549034859747E-4 0.0 2.0061393212936443E-4 1.1368122820663984E-4 16-17 2.6748524283915258E-5 1.404297524905551E-4 0.0 2.0730106320034325E-4 1.2036835927761865E-4 18-19 2.6748524283915258E-5 1.872396699874068E-4 0.0 2.2736245641327967E-4 1.2705549034859747E-4 20-21 2.6748524283915258E-5 2.2736245641327967E-4 0.0 2.407367185552373E-4 1.3374262141957629E-4 22-23 2.6748524283915258E-5 2.407367185552373E-4 0.0 2.4742384962621615E-4 1.538040146325127E-4 24-25 3.343565535489407E-5 2.6079811176817373E-4 0.0 2.87546636052089E-4 1.939268010583856E-4 26-27 4.012278642587288E-5 2.6748524283915257E-4 0.0 3.6110507783285596E-4 2.0061393212936443E-4 28-29 4.012278642587288E-5 2.6748524283915257E-4 0.0 7.355844178076696E-4 2.0730106320034325E-4 30-31 4.012278642587288E-5 2.808595049811102E-4 0.0 0.0020195135834356016 2.1398819427132206E-4 32-33 4.012278642587288E-5 2.808595049811102E-4 0.0 0.004701053142898107 2.1398819427132206E-4 34-35 5.349704856783051E-5 3.209822914069831E-4 0.0 0.007609955158773891 2.6748524283915257E-4 36-37 6.687131070978814E-5 3.6110507783285596E-4 0.0 0.012244136990962207 2.808595049811102E-4 38-39 6.687131070978814E-5 4.146021264006865E-4 0.0 0.018630347163746976 2.808595049811102E-4 40-41 6.687131070978814E-5 4.5472491282655934E-4 0.0 0.025049992991886635 2.808595049811102E-4 42-43 8.024557285174576E-5 4.68099174968517E-4 0.0 0.03130914767432281 2.87546636052089E-4 44-45 8.024557285174576E-5 5.617190099622203E-4 0.0 0.038725176032038316 3.343565535489407E-4 46-47 8.024557285174576E-5 6.419645828139661E-4 0.0 0.04644881241901884 3.677922089038348E-4 48-49 8.024557285174576E-5 6.419645828139661E-4 0.0 0.05414570028171546 3.878536021167712E-4 50-51 8.024557285174576E-5 7.690200731625636E-4 0.0 0.06118724929945615 3.878536021167712E-4 52-53 8.024557285174576E-5 7.757072042335425E-4 0.0 0.06788775463257693 4.146021264006865E-4 54-55 8.024557285174576E-5 7.757072042335425E-4 0.0 0.07422715488786483 4.5472491282655934E-4 56-57 8.024557285174576E-5 7.890814663755E-4 0.0 0.08006502031282933 4.68099174968517E-4 58-59 8.024557285174576E-5 7.890814663755E-4 0.0 0.08633754925740747 4.68099174968517E-4 60-61 8.693270392272458E-5 8.024557285174576E-4 0.0 0.0926702623816244 4.68099174968517E-4 62-63 9.36198349937034E-5 8.29204252801373E-4 0.0 0.09890266853977667 4.814734371104746E-4 64-65 9.36198349937034E-5 9.763211363629069E-4 0.0 0.10480740527545096 4.814734371104746E-4 66-67 9.36198349937034E-5 9.896953985048644E-4 0.0 0.11115349266180985 4.814734371104746E-4 68-69 9.36198349937034E-5 0.0010164439227887798 0.0 0.1171986591499747 4.814734371104746E-4 70-71 9.36198349937034E-5 0.0010365053160017162 0.0 0.12239455999212523 4.814734371104746E-4 72-73 9.36198349937034E-5 0.001043192447072695 0.0 0.1265405812561321 5.349704856783051E-4 74-75 9.36198349937034E-5 0.0010565667092146526 0.0 0.12958991302449843 5.416576167492839E-4 76-77 9.36198349937034E-5 0.001076628102427589 0.0 0.13252556356465814 5.483447478202627E-4 78-79 9.36198349937034E-5 0.001083315233498568 0.0 0.1345250157548808 5.483447478202627E-4 80-81 9.36198349937034E-5 0.0010966894956405257 0.0 0.1351870417309077 5.617190099622203E-4 82-83 9.36198349937034E-5 0.0011100637577824831 0.0 0.1355347725465986 5.884675342461357E-4 84-85 9.36198349937034E-5 0.0011234380199244406 0.0 0.135722012216586 5.884675342461357E-4 86-87 9.36198349937034E-5 0.00118362219956325 0.0 0.1357888835272958 5.884675342461357E-4 88 9.36198349937034E-5 0.001230432117060102 0.0 0.1357888835272958 6.018417963880933E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 11870 0.0 57.82163 1 GGTATCA 9625 0.0 50.378986 1 TTATACA 15525 0.0 44.723553 2 TATACAC 16215 0.0 43.935677 3 GTATCAA 17545 0.0 37.70476 1 TACACAT 22455 0.0 31.459597 5 TCAACGC 21450 0.0 30.173347 4 ATCAACG 21465 0.0 30.133274 3 CAACGCA 21875 0.0 29.621805 5 ACACATC 23140 0.0 29.559687 6 TATCAAC 22150 0.0 29.486183 2 AACGCAG 22585 0.0 28.703835 6 ACATCTC 24740 0.0 27.851904 8 ATACACA 27410 0.0 27.064604 4 CACATCT 25310 0.0 26.958889 7 ACGCAGA 25975 0.0 24.957693 7 CGCAGAG 26580 0.0 24.421251 8 CATCTCC 28250 0.0 24.346722 9 GTGGTAT 4765 0.0 22.682508 1 TGGTATC 4510 0.0 22.473017 2 >>END_MODULE