##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138635_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8671522 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.82914983090627 33.0 33.0 33.0 33.0 33.0 2 32.824133641130125 33.0 33.0 33.0 33.0 33.0 3 32.82260853400361 33.0 33.0 33.0 33.0 33.0 4 36.775657145308514 37.0 37.0 37.0 37.0 37.0 5 36.789586533944096 37.0 37.0 37.0 37.0 37.0 6 36.79598333487478 37.0 37.0 37.0 37.0 37.0 7 36.78274482841651 37.0 37.0 37.0 37.0 37.0 8 36.78198106399315 37.0 37.0 37.0 37.0 37.0 9 36.78128695285557 37.0 37.0 37.0 37.0 37.0 10-11 36.760293233413925 37.0 37.0 37.0 37.0 37.0 12-13 36.74526968852757 37.0 37.0 37.0 37.0 37.0 14-15 39.08917206229772 40.0 40.0 40.0 37.0 40.0 16-17 39.04327481381008 40.0 40.0 40.0 37.0 40.0 18-19 39.07526354658387 40.0 40.0 40.0 37.0 40.0 20-21 39.09014596445369 40.0 40.0 40.0 37.0 40.0 22-23 39.12334151510438 40.0 40.0 40.0 37.0 40.0 24-25 39.1248564761635 40.0 40.0 40.0 37.0 40.0 26-27 39.04657958306413 40.0 40.0 40.0 37.0 40.0 28-29 38.97853460347296 40.0 40.0 40.0 37.0 40.0 30-31 38.90586973447246 40.0 40.0 40.0 37.0 40.0 32-33 38.877626250004994 40.0 40.0 40.0 37.0 40.0 34-35 38.85883118383143 40.0 40.0 40.0 37.0 40.0 36-37 38.827352029529365 40.0 38.5 40.0 37.0 40.0 38-39 38.783767249790756 40.0 37.0 40.0 37.0 40.0 40-41 38.743186458445905 40.0 37.0 40.0 37.0 40.0 42-43 38.679926652271504 40.0 37.0 40.0 37.0 40.0 44-45 38.60046020416952 40.0 37.0 40.0 37.0 40.0 46-47 38.52532637688607 40.0 37.0 40.0 37.0 40.0 48-49 38.48525953361594 40.0 37.0 40.0 37.0 40.0 50-51 38.440563777836616 40.0 37.0 40.0 37.0 40.0 52-53 38.369204089459245 40.0 37.0 40.0 37.0 40.0 54-55 38.30636362560675 40.0 37.0 40.0 37.0 40.0 56-57 38.20925589216199 40.0 37.0 40.0 37.0 40.0 58-59 38.09360556713003 40.0 37.0 40.0 37.0 40.0 60-61 37.93205963136862 40.0 37.0 40.0 35.0 40.0 62-63 37.74820475051356 40.0 37.0 40.0 33.0 40.0 64-65 37.524825064199284 37.0 37.0 40.0 33.0 40.0 66-67 37.29133348999475 37.0 37.0 40.0 33.0 40.0 68-69 37.04800188350825 37.0 37.0 40.0 33.0 40.0 70-71 36.78322660109602 37.0 37.0 40.0 33.0 40.0 72-73 36.53233282205001 37.0 37.0 38.5 33.0 40.0 74-75 36.287146928867955 37.0 37.0 37.0 33.0 40.0 76-77 34.67358878714957 37.0 33.0 37.0 30.0 37.0 78-79 35.8762211161632 37.0 37.0 37.0 33.0 37.0 80-81 35.97374482134405 37.0 37.0 37.0 33.0 37.0 82-83 35.895206568483246 37.0 37.0 37.0 33.0 37.0 84-85 35.76666141588049 37.0 37.0 37.0 33.0 37.0 86-87 35.655659328142605 37.0 37.0 37.0 33.0 37.0 88-89 35.58168815679059 37.0 37.0 37.0 33.0 37.0 90-91 35.51950375037829 37.0 35.0 37.0 33.0 37.0 92-93 35.45290446078908 37.0 33.0 37.0 33.0 37.0 94-95 35.40825142302323 37.0 33.0 37.0 33.0 37.0 96-97 35.37440770114789 37.0 33.0 37.0 33.0 37.0 98-99 35.332929804328614 37.0 33.0 37.0 33.0 37.0 100 35.272565327493226 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 21.0 21 96.0 22 408.0 23 1283.0 24 3155.0 25 6698.0 26 12591.0 27 20971.0 28 32149.0 29 45950.0 30 63442.0 31 87126.0 32 117756.0 33 162599.0 34 234429.0 35 361286.0 36 721141.0 37 2348508.0 38 4249328.0 39 202579.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77510014966231 20.228974798195747 14.58033549358463 23.415589558557308 2 14.466687624156405 20.988057229169225 42.007896652975106 22.537358493699262 3 18.00684784589233 26.12651562503604 30.68992796961023 25.176708559461396 4 12.315574153358988 18.149547007239903 39.30157666899869 30.23330217040241 5 13.223972859729633 37.75644553162596 35.591754526944364 13.427827081700054 6 29.570068553132888 38.110172585619914 18.895656379583652 13.42410248166354 7 26.15840679410143 33.11809622347726 23.139548051656906 17.583948930764404 8 24.284502766642348 36.57428303820252 21.280370389419527 17.860843805735602 9 25.512130396486338 17.001582882451316 21.543219287225472 35.94306743383687 10-11 23.96929858449301 26.98941431504181 28.94908759961631 20.09219950084887 12-13 24.898570285585393 24.623607020774436 29.10670698869241 21.37111570494776 14-15 22.01407088628732 26.04897963702335 27.074422460094087 24.86252701659524 16-17 21.311016681961945 29.124154906139893 27.750612868190842 21.81421554370732 18-19 21.257715773540102 28.186493674351514 29.725168199999953 20.83062235210843 20-21 22.22082553994231 27.351830045242124 29.590456749317838 20.83688766549772 22-23 21.86939367838015 27.24044837482952 29.482605082048106 21.407552864742225 24-25 21.603127327438422 27.373637522992126 29.60121291966853 21.422022229900925 26-27 21.574817955967752 27.5643961789742 29.437410582506274 21.423375282551778 28-29 21.463684964428268 27.736996063274404 29.456123613380143 21.343195358917185 30-31 21.813808898498205 27.51357073066384 29.334765359881704 21.337855010956254 32-33 21.558579185671405 27.683626591275146 29.270989903185935 21.486804319867513 34-35 21.680484705181442 27.73806166393758 29.239152359848468 21.342301271032515 36-37 21.69257864425031 27.68228000110895 29.186103689739152 21.43903766490159 38-39 21.548492480563013 27.880314294420444 29.162292021710496 21.408901203306055 40-41 21.886212638336016 27.71846388185235 28.97502442093412 21.42029905887751 42-43 21.738754831367306 27.825982720098068 28.789360666983388 21.645901781551242 44-45 21.911453659064566 27.964552600603415 28.5346514113567 21.589342328975317 46-47 21.893732647149438 27.943210565238818 28.22812393847193 21.93493284913981 48-49 21.869037362679446 28.080177614403773 28.198078650688274 21.852706372228504 50-51 21.900863008132017 28.23185960695828 28.00593612584448 21.86134125906522 52-53 22.054961230484736 28.1320169877058 27.843132629504176 21.969889152305296 54-55 22.065660346314715 27.992133407783648 27.946641817469853 21.995564428431784 56-57 22.03729821838384 28.09768000568743 27.897567106852893 21.967454669075835 58-59 21.980632044801684 28.157067149178904 27.929402264213323 21.932898541806093 60-61 22.086675652293042 28.083945634271668 27.916412121600086 21.912966591835204 62-63 22.011707300436896 28.158225521118318 27.82577302202641 22.004294156418382 64-65 21.984722420273677 28.14738337045321 27.82645466713831 22.041439542134803 66-67 22.082063868388236 28.19427418852532 27.643804591410092 22.079857351676356 68-69 22.051659953751635 28.14597437507338 27.74210899374513 22.060256677429855 70-71 22.030027137106227 27.8937903518366 27.793476961157527 22.282705549899646 72-73 22.07360006242681 27.96482325682411 27.76218168602589 22.199394994723185 74-75 21.994839630737975 28.11660982924396 27.660159061231198 22.228391478786865 76-77 22.10848694153599 28.110228097875677 27.571100808697885 22.21018415189045 78-79 22.10901034189088 28.141892337745812 27.513056177434287 22.236041142929025 80-81 22.066161119100624 28.103134143355618 27.53897500509964 22.291729732444118 82-83 22.160330056298562 28.049137459715578 27.67288434583492 22.11764813815094 84-85 22.313712950999655 28.039482037669305 27.529643112027653 22.11716189930339 86-87 22.069234437089193 28.066294452048247 27.64718334881015 22.21728776205241 88-89 22.163151263973493 28.080139106779633 27.564703563523622 22.19200606572325 90-91 22.234505499292755 28.087752749384393 27.601796068108786 22.07594568321406 92-93 22.24940459219234 28.05956798165675 27.610275935992895 22.08075149015801 94-95 22.091969809812134 28.16898024366904 27.63728510616477 22.10176484035405 96-97 22.160221417673394 28.2619400465221 27.752377691903657 21.825460843900853 98-99 23.276876479613655 30.149875569368312 27.89971728880292 18.673530662215114 100 22.151298500848686 31.13525619309854 21.89831174103751 24.815133565015262 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2036.0 1 1849.5 2 2568.5 3 3731.0 4 5275.5 5 8756.5 6 11526.5 7 13191.0 8 14037.0 9 13592.0 10 12700.5 11 12083.5 12 13615.0 13 18287.5 14 28461.5 15 41847.5 16 52828.0 17 59620.0 18 61158.0 19 57852.5 20 52265.0 21 46641.0 22 43535.0 23 45488.0 24 51924.5 25 63300.5 26 79597.0 27 97854.5 28 116227.5 29 135942.0 30 155301.5 31 173579.0 32 192956.5 33 212424.0 34 232958.5 35 252349.5 36 272226.0 37 291181.0 38 302984.0 39 311896.0 40 323918.5 41 334790.0 42 341075.5 43 347460.0 44 353126.5 45 357849.5 46 360467.0 47 360599.0 48 357930.0 49 351273.5 50 342501.5 51 328854.0 52 311827.0 53 292879.5 54 273199.5 55 252624.0 56 230997.0 57 208434.0 58 185705.0 59 162549.0 60 135154.0 61 108927.5 62 86387.0 63 66616.5 64 50036.5 65 36794.5 66 27241.0 67 20730.0 68 15757.5 69 11238.0 70 7778.0 71 5378.0 72 3639.0 73 2432.0 74 1673.0 75 1137.5 76 734.0 77 444.5 78 271.5 79 192.5 80 145.0 81 96.0 82 66.5 83 48.0 84 38.0 85 32.5 86 25.5 87 18.0 88 12.5 89 11.0 90 10.5 91 8.5 92 5.0 93 2.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0020988241741184536 4 0.011116848922253786 5 0.018462733531668375 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0038930312664048014 26-27 0.0428535428826196 28-29 0.08919995382128838 30-31 0.08559028165092089 32-33 0.035668972240594836 34-35 0.003062467123514703 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 1.383677038709749E-4 56-57 3.1075304468222904E-4 58-59 2.5587505109504927E-5 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 3.377781560893126E-5 72-73 0.012781128561375539 74-75 0.026305191161841296 76-77 0.004949065634480641 78-79 0.0 80-81 0.0 82-83 0.005876929639678277 84-85 0.04583340996370544 86-87 0.043622509156190536 88-89 0.011222518423387817 90-91 1.6467498509878517E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 92.0 20-21 468.0 22-23 1081.0 24-25 2386.0 26-27 3888.0 28-29 8023.0 30-31 19209.0 32-33 24658.0 34-35 33803.0 36-37 49282.0 38-39 57905.0 40-41 61367.0 42-43 73111.0 44-45 86455.0 46-47 83679.0 48-49 73834.0 50-51 65020.0 52-53 61508.0 54-55 64930.0 56-57 67538.0 58-59 67759.0 60-61 66787.0 62-63 66136.0 64-65 68824.0 66-67 72046.0 68-69 72227.0 70-71 71555.0 72-73 68093.0 74-75 69382.0 76-77 69838.0 78-79 72533.0 80-81 73701.0 82-83 71319.0 84-85 71197.0 86-87 73941.0 88-89 77943.0 90-91 80595.0 92-93 82953.0 94-95 98208.0 96-97 272181.0 98-99 513202.0 100-101 5652865.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.99583697608755 #Duplication Level Percentage of deduplicated Percentage of total 1 88.78388693997918 74.5747689351388 2 7.742322376422363 13.00645696292575 3 1.960492956482834 4.940197402965 4 0.7173586309467567 2.4102055447357253 5 0.32568946476291627 1.3678279593527565 6 0.1675045561317451 0.8441811233756379 7 0.09048257783837506 0.5320111900101813 8 0.053745194091001404 0.36114980488927506 9 0.04326745588235683 0.32708575535980544 >10 0.11287009325692912 1.392976547355504 >50 0.0017681745338518462 0.09801267544078611 >100 5.228382363712397E-4 0.07895442354865122 >500 6.655641608080458E-5 0.038201301453920505 >1k 2.218501929129461E-5 0.02797037344818112 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.1532000956694799E-5 0.0 3 0.0 0.0 0.0 1.1532000956694799E-5 0.0 4 0.0 1.1532000956694799E-5 0.0 2.3064001913389597E-5 0.0 5 0.0 1.1532000956694799E-5 0.0 3.45960028700844E-5 0.0 6 3.45960028700844E-5 1.1532000956694799E-5 0.0 3.45960028700844E-5 0.0 7 3.45960028700844E-5 2.3064001913389597E-5 0.0 3.45960028700844E-5 0.0 8 3.45960028700844E-5 2.3064001913389597E-5 0.0 3.45960028700844E-5 0.0 9 3.45960028700844E-5 4.6128003826779195E-5 0.0 3.45960028700844E-5 0.0 10-11 3.45960028700844E-5 4.6128003826779195E-5 0.0 4.6128003826779195E-5 5.766000478347399E-6 12-13 3.45960028700844E-5 4.6128003826779195E-5 0.0 6.91920057401688E-5 1.1532000956694799E-5 14-15 3.45960028700844E-5 1.326180110019902E-4 0.0 7.49580062185162E-5 1.1532000956694799E-5 16-17 6.91920057401688E-5 1.383840114803376E-4 0.0 9.80220081319058E-5 1.1532000956694799E-5 18-19 6.91920057401688E-5 1.499160124370324E-4 0.0 1.383840114803376E-4 1.1532000956694799E-5 20-21 6.91920057401688E-5 1.614480133937272E-4 0.0 1.72980014350422E-4 1.1532000956694799E-5 22-23 6.91920057401688E-5 1.960440162638116E-4 0.0 1.9604401626381157E-4 1.1532000956694799E-5 24-25 6.91920057401688E-5 2.0757601722050639E-4 0.0 2.364060196122434E-4 1.1532000956694799E-5 26-27 6.91920057401688E-5 2.0757601722050639E-4 0.0 3.45960028700844E-4 1.1532000956694799E-5 28-29 6.91920057401688E-5 2.0757601722050639E-4 0.0 8.187720679253307E-4 1.1532000956694799E-5 30-31 6.91920057401688E-5 2.0757601722050639E-4 0.0 0.0024620822042543396 1.1532000956694799E-5 32-33 7.49580062185162E-5 2.0757601722050639E-4 0.0 0.006071598503699812 1.72980014350422E-5 34-35 8.07240066968636E-5 2.2487401865554858E-4 0.0 0.010228884848588287 2.3064001913389597E-5 36-37 8.07240066968636E-5 2.652360220039804E-4 0.0 0.016715635386729114 2.3064001913389597E-5 38-39 8.07240066968636E-5 2.940660243957174E-4 0.0 0.033246758758151106 2.3064001913389597E-5 40-41 8.07240066968636E-5 3.517260291791914E-4 0.0 0.05075233621041381 2.3064001913389597E-5 42-43 9.802200813190578E-5 3.690240306142336E-4 0.0 0.06267642519963623 2.3064001913389597E-5 44-45 1.0378800861025319E-4 4.03620033484318E-4 0.0 0.07710295839646142 2.3064001913389597E-5 46-47 1.095540090886006E-4 4.3821603635440235E-4 0.0 0.0930113537162219 2.8830002391736996E-5 48-49 1.15320009566948E-4 4.3821603635440235E-4 0.0 0.10833738298766929 4.6128003826779195E-5 50-51 1.268520105236428E-4 4.8434404018118157E-4 0.0 0.12239489215388026 4.6128003826779195E-5 52-53 1.268520105236428E-4 5.074080420945712E-4 0.0 0.15543407489481087 4.6128003826779195E-5 54-55 1.326180110019902E-4 5.074080420945712E-4 0.0 0.1953520962064099 4.6128003826779195E-5 56-57 1.4991601243703238E-4 5.074080420945712E-4 0.0 0.23608312358545594 4.6128003826779195E-5 58-59 1.72980014350422E-4 5.131740425729186E-4 0.0 0.2618398477222338 4.6128003826779195E-5 60-61 1.72980014350422E-4 5.362380444863082E-4 0.0 0.2804409652653825 4.6128003826779195E-5 62-63 1.72980014350422E-4 5.420040449646556E-4 0.0 0.29492515846699113 4.6128003826779195E-5 64-65 1.72980014350422E-4 5.881320487914348E-4 0.0 0.30251898109697467 4.6128003826779195E-5 66-67 1.72980014350422E-4 5.881320487914348E-4 0.0 0.30984756770495425 4.6128003826779195E-5 68-69 1.72980014350422E-4 6.111960507048243E-4 0.0 0.3171242603086286 4.6128003826779195E-5 70-71 1.72980014350422E-4 6.342600526182139E-4 0.0 0.3226826847697555 4.6128003826779195E-5 72-73 1.845120153071168E-4 6.342600526182139E-4 0.0 0.326707353103642 4.6128003826779195E-5 74-75 1.960440162638116E-4 6.342600526182139E-4 0.0 0.32980946136099293 4.6128003826779195E-5 76-77 1.960440162638116E-4 6.457920535749087E-4 0.0 0.3334593396637868 4.6128003826779195E-5 78-79 1.960440162638116E-4 6.573240545316036E-4 0.0 0.335852229862301 4.6128003826779195E-5 80-81 1.960440162638116E-4 6.573240545316036E-4 0.0 0.3365556819206594 4.6128003826779195E-5 82-83 1.960440162638116E-4 6.688560554882983E-4 0.0 0.3371438139694508 4.6128003826779195E-5 84-85 2.0757601722050639E-4 6.688560554882983E-4 0.0 0.3373513899866713 4.6128003826779195E-5 86-87 2.0757601722050639E-4 6.91920057401688E-4 0.0 0.3374378799938465 4.6128003826779195E-5 88 2.0757601722050639E-4 6.91920057401688E-4 0.0 0.3374378799938465 4.6128003826779195E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13330 0.0 49.57124 1 GTATCAA 24145 0.0 36.958214 1 ATCAACG 29345 0.0 29.961092 3 TCAACGC 29475 0.0 29.900377 4 CAACGCA 29780 0.0 29.577686 5 TATCAAC 30370 0.0 29.159374 2 AACGCAG 30450 0.0 28.947052 6 CGCAGAG 34470 0.0 25.53426 8 ACGCAGA 34485 0.0 25.523153 7 GCAGAGT 40130 0.0 21.90117 9 GTGGTAT 6525 0.0 20.604933 1 GAGTACT 25160 0.0 20.347624 12-13 TGGTATC 6270 0.0 19.887136 2 GTACATG 27295 0.0 19.671753 1 TACATGG 26200 0.0 19.635952 2 CAGAGTA 39400 0.0 19.385422 10-11 AGAGTAC 36810 0.0 19.021727 10-11 ACATGGG 26820 0.0 18.59692 3 GTACTTT 27850 0.0 18.352299 14-15 AGTACTT 26730 0.0 17.915316 12-13 >>END_MODULE