##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138633_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7808015 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.89154067967338 33.0 33.0 33.0 33.0 33.0 2 32.94881157374826 33.0 33.0 33.0 33.0 33.0 3 33.617996379361465 33.0 33.0 33.0 33.0 37.0 4 36.780762075892525 37.0 37.0 37.0 37.0 37.0 5 36.79448617862543 37.0 37.0 37.0 37.0 37.0 6 36.79664818779165 37.0 37.0 37.0 37.0 37.0 7 36.788291390321355 37.0 37.0 37.0 37.0 37.0 8 36.77710006960796 37.0 37.0 37.0 37.0 37.0 9 36.78316435099062 37.0 37.0 37.0 37.0 37.0 10-11 36.77761332425719 37.0 37.0 37.0 37.0 37.0 12-13 37.03050826618545 37.0 37.0 37.0 37.0 38.5 14-15 39.09017208599113 40.0 40.0 40.0 37.0 40.0 16-17 39.043036930641144 40.0 40.0 40.0 37.0 40.0 18-19 39.08481310550761 40.0 40.0 40.0 37.0 40.0 20-21 39.107793351151656 40.0 40.0 40.0 37.0 40.0 22-23 39.13775604079957 40.0 40.0 40.0 37.0 40.0 24-25 39.12822452380016 40.0 40.0 40.0 37.0 40.0 26-27 39.04876202326247 40.0 40.0 40.0 37.0 40.0 28-29 38.985794112000036 40.0 40.0 40.0 37.0 40.0 30-31 38.913230194990305 40.0 40.0 40.0 37.0 40.0 32-33 38.88122508945378 40.0 40.0 40.0 37.0 40.0 34-35 38.8624767295186 40.0 40.0 40.0 37.0 40.0 36-37 38.826474216907144 40.0 37.0 40.0 37.0 40.0 38-39 38.78419760469256 40.0 37.0 40.0 37.0 40.0 40-41 38.742553609652354 40.0 37.0 40.0 37.0 40.0 42-43 38.67403279023341 40.0 37.0 40.0 37.0 40.0 44-45 38.591270243223846 40.0 37.0 40.0 37.0 40.0 46-47 38.51152910955031 40.0 37.0 40.0 37.0 40.0 48-49 38.470428456372304 40.0 37.0 40.0 37.0 40.0 50-51 38.42185443005282 40.0 37.0 40.0 37.0 40.0 52-53 38.35718326914153 40.0 37.0 40.0 37.0 40.0 54-55 38.29313369868852 40.0 37.0 40.0 37.0 40.0 56-57 38.19097252974572 40.0 37.0 40.0 37.0 40.0 58-59 38.07284333814698 40.0 37.0 40.0 37.0 40.0 60-61 37.9027227730834 40.0 37.0 40.0 35.0 40.0 62-63 37.715258013128434 38.5 37.0 40.0 33.0 40.0 64-65 37.48831679720759 37.0 37.0 40.0 33.0 40.0 66-67 37.250463120885364 37.0 37.0 40.0 33.0 40.0 68-69 37.00196844392079 37.0 37.0 40.0 33.0 40.0 70-71 36.73486603976016 37.0 37.0 40.0 33.0 40.0 72-73 36.4754860861287 37.0 37.0 37.0 33.0 40.0 74-75 36.04021896839056 37.0 37.0 37.0 33.0 40.0 76-77 34.83452799220673 37.0 33.0 37.0 30.0 37.0 78-79 35.883632976533924 37.0 37.0 37.0 33.0 37.0 80-81 35.95949237348568 37.0 37.0 37.0 33.0 37.0 82-83 35.88186787399327 37.0 37.0 37.0 33.0 37.0 84-85 35.760540091971485 37.0 37.0 37.0 33.0 37.0 86-87 35.656972639893795 37.0 37.0 37.0 33.0 37.0 88-89 35.58585496330785 37.0 37.0 37.0 33.0 37.0 90-91 35.521610582448716 37.0 35.0 37.0 33.0 37.0 92-93 35.45340778184804 37.0 33.0 37.0 33.0 37.0 94-95 35.41186916939897 37.0 33.0 37.0 33.0 37.0 96-97 35.373932207788165 37.0 33.0 37.0 33.0 37.0 98-99 35.32588119898085 37.0 33.0 37.0 33.0 37.0 100 35.2498404499421 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 30.0 21 73.0 22 356.0 23 1105.0 24 2780.0 25 5827.0 26 10983.0 27 18286.0 28 27808.0 29 40716.0 30 56622.0 31 78505.0 32 106751.0 33 146093.0 34 211233.0 35 326403.0 36 648143.0 37 2120051.0 38 3796901.0 39 209341.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.0195883734104 0.0 24.695264433307432 29.285147193282175 2 15.129654374111723 23.692208109400276 38.57306481559631 22.605072700891693 3 16.721215311531807 24.50914544725662 32.975545966743134 25.794093274468445 4 13.024772860368497 23.17079137789077 37.300098423330994 26.504337338409744 5 17.419900182570363 36.32489301386872 32.03932493669344 14.215881866867482 6 27.990686493302075 37.130141271501145 20.274640865828257 14.604531369368527 7 26.27443722892438 33.16052799591189 22.12882531603743 18.436209459126296 8 24.23140836691528 32.090217552092305 22.12737808521116 21.550995995781257 9 24.101900418992535 20.544555818604344 23.541271373069854 31.81227238933327 10-11 24.678525848118888 26.16685546838729 28.36072932749233 20.793889356001493 12-13 25.091883148277766 24.37919240677688 28.358391985671133 22.17053245927422 14-15 22.48711100068327 26.70930447751445 26.774846103651186 24.02873841815109 16-17 21.273198117575337 29.01585101975342 27.76768487253162 21.94326599013962 18-19 21.316908668056776 27.883502499291435 29.817682168305815 20.981906664345974 20-21 22.285721275048058 27.100115262713366 29.771496265504737 20.842667196733835 22-23 22.102444709256762 26.863968565452957 29.552125974892558 21.481460750397726 24-25 21.679990770274056 27.175841589511524 29.747333689889793 21.396833950324627 26-27 21.57575855481414 27.404476816561218 29.550349682581412 21.46941494604323 28-29 21.555759788627114 27.39575263797426 29.594661804085842 21.45382576931278 30-31 21.824732088069652 27.203769410716117 29.619195300389528 21.352303200824704 32-33 21.610798567678724 27.464107537955773 29.446958407940098 21.4781354864254 34-35 21.783235537216193 27.394330477580965 29.371482567125828 21.450951418077015 36-37 21.73665275139564 27.414592095105938 29.362173376587315 21.48658177691111 38-39 21.57378198957778 27.646093423929468 29.363720145256565 21.416404441236185 40-41 21.923606975754996 27.3607564702418 29.141452082583513 21.57418447141969 42-43 21.823153395991262 27.4315123537301 29.060776610516942 21.6845576397617 44-45 21.89700508614398 27.782182937761334 28.65235187490857 21.668460101186113 46-47 22.01532184365016 27.654665190907846 28.33098010717723 21.999032858264762 48-49 21.945545985144843 27.842674708447962 28.292390868923533 21.919388437483665 50-51 22.012111264297584 28.06752499780049 27.960521982509167 21.95984175539276 52-53 22.174220755746713 27.839894132153027 27.904562732048277 22.081322380051986 54-55 22.161846665062562 27.801312955388024 27.947129934266346 22.089710445283067 56-57 22.14356387916364 28.077670564422363 27.80731363421441 21.971451922199588 58-59 22.16400957808719 27.889236812062308 27.89168573081893 22.055067879031576 60-61 22.144167596327552 27.989070791707864 27.8953101818333 21.97145143013128 62-63 22.14431181919365 28.081480179598234 27.767539350573074 22.00666865063504 64-65 22.172885110806646 27.922164104349754 27.701700677697406 22.203250107146193 66-67 22.18268471473722 27.969801515538727 27.67335990575773 22.17415386396631 68-69 22.189624664775064 27.997379048728572 27.745581879000685 22.06741440749568 70-71 22.205842151234506 27.647278026331097 27.775229272838935 22.37165054959546 72-73 22.20457286035403 27.795838362716097 27.739089579039167 22.26049919789071 74-75 22.126256121423506 27.951574524494262 27.6978391477848 22.224330206297434 76-77 22.335625813596906 27.750210802053253 27.53037491916398 22.383788465185862 78-79 22.154704359755602 27.854302636934808 27.685546439336534 22.305446563973057 80-81 22.21256013046233 27.8828179508317 27.608187821117667 22.2964340975883 82-83 22.36820285919685 27.701692597551354 27.672515837578725 22.257588705673072 84-85 22.405106160392677 27.712094240231146 27.681647528166582 22.2011520712096 86-87 22.26203018695361 27.80166763586804 27.65912245452312 22.277179722655227 88-89 22.366576889358186 27.61339960796431 27.650510806122377 22.36951269655513 90-91 22.381192725097048 27.599769344679796 27.73266542680675 22.286372503416402 92-93 22.358079655472 27.66344503057437 27.722490345484097 22.255984968469537 94-95 22.378452954151612 27.561275783444227 27.75995474661162 22.300316515792538 96-97 22.389752500680203 27.839069121185528 27.856633327711293 21.914545050422976 98-99 23.43904434994168 29.934823845578016 27.36840911356732 19.25772269091299 100 22.485079306157065 30.29497872220507 21.77416749124145 25.445774480396416 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1643.0 1 1494.5 2 2101.0 3 3119.5 4 4576.0 5 7609.0 6 9943.5 7 11712.5 8 13276.0 9 13572.0 10 12898.5 11 12191.0 12 13616.0 13 17941.0 14 27980.5 15 42352.0 16 54730.0 17 61775.0 18 62052.0 19 57018.0 20 49881.0 21 42409.5 22 37370.0 23 37512.0 24 42226.0 25 51067.0 26 63877.5 27 78706.0 28 93693.0 29 110689.0 30 127911.0 31 144645.5 32 162791.5 33 180464.5 34 198091.5 35 214313.5 36 230997.5 37 248305.5 38 260983.5 39 270605.0 40 281356.0 41 292124.0 42 299481.0 43 306195.5 44 312729.5 45 318349.5 46 322295.0 47 324823.0 48 324969.0 49 319333.5 50 311879.5 51 302688.5 52 288587.5 53 272720.0 54 255670.5 55 234924.5 56 213793.5 57 191866.0 58 169425.5 59 147944.5 60 124617.5 61 101653.0 62 80453.0 63 61901.0 64 46537.0 65 34216.5 66 25526.5 67 19125.5 68 14442.5 69 10396.5 70 7162.0 71 5027.0 72 3392.0 73 2162.0 74 1361.0 75 892.5 76 563.0 77 359.0 78 243.0 79 165.5 80 112.0 81 78.0 82 59.0 83 43.5 84 32.0 85 19.5 86 12.5 87 10.0 88 6.5 89 6.5 90 5.0 91 4.0 92 3.5 93 2.5 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.0491763911826503E-4 2 8.196705564730601E-4 3 0.003906242495691927 4 0.011821186306634913 5 0.014882143540963998 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 2.561470488978313E-5 20-21 5.1230692512807186E-5 22-23 3.522374249318004E-4 24-25 0.007648146813672504 26-27 0.04687075103666696 28-29 0.08791980923568299 30-31 0.07825185660424297 32-33 0.03017989351571515 34-35 0.002359999174645097 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 6.8752493567001055E-6 54-55 1.9393281197729046E-4 56-57 2.652809691970399E-4 58-59 7.03712236866161E-6 60-61 0.0 62-63 0.0 64-65 0.0 66-67 7.272677025140553E-6 68-69 7.339950004664537E-5 70-71 0.0011927453523492009 72-73 0.014248718026542087 74-75 0.022837985205331368 76-77 0.0036865196923370814 78-79 4.615026063359693E-5 80-81 4.895343766580063E-4 82-83 0.009774358348703414 84-85 0.04264846237500618 86-87 0.03612448275488865 88-89 0.008595823565044841 90-91 1.0672394513436914E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 119.0 20-21 439.0 22-23 1022.0 24-25 2306.0 26-27 3540.0 28-29 7137.0 30-31 14105.0 32-33 19219.0 34-35 26820.0 36-37 37263.0 38-39 43895.0 40-41 47831.0 42-43 60153.0 44-45 72891.0 46-47 71328.0 48-49 60773.0 50-51 53649.0 52-53 52654.0 54-55 56230.0 56-57 57307.0 58-59 56960.0 60-61 55740.0 62-63 56396.0 64-65 59646.0 66-67 62939.0 68-69 63001.0 70-71 61393.0 72-73 60698.0 74-75 62680.0 76-77 63023.0 78-79 65358.0 80-81 66458.0 82-83 64803.0 84-85 66379.0 86-87 69738.0 88-89 74374.0 90-91 76357.0 92-93 79739.0 94-95 101724.0 96-97 362169.0 98-99 1373496.0 100-101 4116263.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.80084124350556 #Duplication Level Percentage of deduplicated Percentage of total 1 89.50912352776733 76.79958097651294 2 7.640342411025538 13.110956125088494 3 1.6909451395039858 4.3525354639817655 4 0.5782555859667675 1.9845926291881963 5 0.24639990002780937 1.0570659352350857 6 0.12531198488503253 0.6451124232617548 7 0.06569244552303762 0.39455269624538514 8 0.040078118934299196 0.2750989056016112 9 0.023882797926624316 0.18442477380177152 >10 0.07822544366057543 1.0001361406806462 >50 0.0012757208537480208 0.0723611274129224 >100 4.2238409162577683E-4 0.08808055933667572 >500 2.2269927775547733E-5 0.013604743187527635 >1k 2.226990583322726E-5 0.021897500465206148 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 1.2807352444891563E-5 5 0.0 0.0 0.0 0.0 1.2807352444891563E-5 6 0.0 1.2807352444891563E-5 0.0 1.2807352444891563E-5 1.2807352444891563E-5 7 0.0 1.2807352444891563E-5 0.0 2.5614704889783125E-5 1.2807352444891563E-5 8 0.0 2.5614704889783125E-5 0.0 2.5614704889783125E-5 1.2807352444891563E-5 9 0.0 5.122940977956625E-5 0.0 3.842205733467469E-5 1.2807352444891563E-5 10-11 1.2807352444891563E-5 5.122940977956625E-5 0.0 6.403676222445782E-5 2.5614704889783125E-5 12-13 1.2807352444891563E-5 5.122940977956625E-5 0.0 7.04404384469036E-5 3.201838111222891E-5 14-15 1.2807352444891563E-5 1.024588195591325E-4 0.0 9.605514333668673E-5 4.4825733557120475E-5 16-17 1.2807352444891563E-5 1.0886249578157828E-4 0.0 1.2166984822646986E-4 5.122940977956625E-5 18-19 1.2807352444891563E-5 1.1526617200402406E-4 0.0 1.47284553116253E-4 5.763308600201204E-5 20-21 1.2807352444891563E-5 1.1526617200402406E-4 0.0 1.6009190556114455E-4 6.403676222445782E-5 22-23 1.2807352444891563E-5 1.2807352444891564E-4 0.0 1.8570661045092765E-4 8.324779089179517E-5 24-25 1.2807352444891563E-5 1.3447720067136142E-4 0.0 1.9851396289581922E-4 1.024588195591325E-4 26-27 1.2807352444891563E-5 1.408808768938072E-4 0.0 2.4333969645293972E-4 1.024588195591325E-4 28-29 1.2807352444891563E-5 1.408808768938072E-4 0.0 4.290463069038674E-4 1.024588195591325E-4 30-31 1.2807352444891563E-5 1.6649558178359034E-4 0.0 8.965146711424094E-4 1.024588195591325E-4 32-33 1.2807352444891563E-5 1.6649558178359034E-4 0.0 0.001933910219178626 1.024588195591325E-4 34-35 1.2807352444891563E-5 1.8570661045092765E-4 0.0 0.0032530675210024574 1.1526617200402406E-4 36-37 1.2807352444891563E-5 2.04917639118265E-4 0.0 0.005001271129730155 1.1526617200402406E-4 38-39 1.2807352444891563E-5 2.04917639118265E-4 0.0 0.007703622495602275 1.1526617200402406E-4 40-41 1.2807352444891563E-5 2.433396964529397E-4 0.0 0.010719753996374239 1.2166984822646986E-4 42-43 1.2807352444891563E-5 2.94569106232506E-4 0.0 0.014100895041825611 1.2807352444891564E-4 44-45 1.2807352444891563E-5 3.4579851601207224E-4 0.0 0.01789827504173596 1.408808768938072E-4 46-47 1.2807352444891563E-5 3.4579851601207224E-4 0.0 0.02172126974653609 1.6649558178359034E-4 48-49 1.2807352444891563E-5 3.4579851601207224E-4 0.0 0.02564031959467291 1.9211028667337344E-4 50-51 1.2807352444891563E-5 4.290463069038673E-4 0.0 0.029444103270805703 1.9851396289581922E-4 52-53 1.2807352444891563E-5 4.4185365934875894E-4 0.0 0.03319665753715893 2.2412866778560235E-4 54-55 1.2807352444891563E-5 4.482573355712047E-4 0.0 0.03739106546286092 2.433396964529397E-4 56-57 1.2807352444891563E-5 4.6106468801609626E-4 0.0 0.041873638818572964 2.497433726753855E-4 58-59 1.2807352444891563E-5 4.6106468801609626E-4 0.0 0.046938946710527577 2.6255072512027704E-4 60-61 1.2807352444891563E-5 4.6746836423854207E-4 0.0 0.05134467595157028 2.6895440134272285E-4 62-63 1.2807352444891563E-5 4.99486745350771E-4 0.0 0.05587847871706189 2.6895440134272285E-4 64-65 1.2807352444891563E-5 5.635235075752288E-4 0.0 0.060303418986771926 2.6895440134272285E-4 66-67 1.2807352444891563E-5 5.635235075752288E-4 0.0 0.06486283645715332 2.6895440134272285E-4 68-69 1.2807352444891563E-5 5.827345362425661E-4 0.0 0.06979366714843657 2.817617537876144E-4 70-71 1.2807352444891563E-5 6.019455649099035E-4 0.0 0.07432106623770574 3.0737645867739754E-4 72-73 1.2807352444891563E-5 6.019455649099035E-4 0.0 0.07780466610271625 3.6500954467940955E-4 74-75 1.2807352444891563E-5 6.147529173547951E-4 0.0 0.0810001005377167 3.7141322090185536E-4 76-77 1.2807352444891563E-5 6.275602697996866E-4 0.0 0.08389456219026219 3.7141322090185536E-4 78-79 1.2807352444891563E-5 6.275602697996866E-4 0.0 0.08555951800809809 3.7141322090185536E-4 80-81 1.2807352444891563E-5 6.275602697996866E-4 0.0 0.08628313342123446 3.778168971243011E-4 82-83 1.2807352444891563E-5 6.275602697996866E-4 0.0 0.08680823487147502 3.842205733467469E-4 84-85 1.2807352444891563E-5 6.339639460221324E-4 0.0 0.08699394148192593 3.906242495691927E-4 86-87 2.5614704889783125E-5 6.403676222445782E-4 0.0 0.08708999662526264 3.9702792579163844E-4 88 2.5614704889783125E-5 6.403676222445782E-4 0.0 0.08708999662526264 3.9702792579163844E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13060 0.0 54.002922 1 GTATCAA 23695 0.0 37.91197 1 ATCAACG 28220 0.0 31.349255 3 TCAACGC 29750 0.0 29.76394 4 TATCAAC 30260 0.0 29.390732 2 CAACGCA 30230 0.0 29.343212 5 AACGCAG 30805 0.0 28.790703 6 ACGCAGA 30965 0.0 28.641937 7 CGCAGAG 35300 0.0 25.11251 8 TGGTATC 5170 0.0 24.810347 2 GTGGTAT 5470 0.0 24.151093 1 GCAGAGT 40410 0.0 21.831522 9 GAGTACT 24570 0.0 21.03911 12-13 GTACATG 27595 0.0 20.415663 1 TACATGG 27110 0.0 20.167591 2 ACATGGG 27000 0.0 19.870958 3 CAGAGTA 39575 0.0 19.778765 10-11 AGAGTAC 37290 0.0 19.145838 10-11 GTACTTT 27245 0.0 18.762589 14-15 AGTACTT 26375 0.0 18.161837 12-13 >>END_MODULE