##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138631_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8000037 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.80928950703603 33.0 33.0 33.0 33.0 33.0 2 32.807632639699044 33.0 33.0 33.0 33.0 33.0 3 32.80173291698526 33.0 33.0 33.0 33.0 33.0 4 36.754637634800936 37.0 37.0 37.0 37.0 37.0 5 36.76948644112521 37.0 37.0 37.0 37.0 37.0 6 36.77420254431323 37.0 37.0 37.0 37.0 37.0 7 36.75882961541303 37.0 37.0 37.0 37.0 37.0 8 36.755354881483676 37.0 37.0 37.0 37.0 37.0 9 36.75606812818491 37.0 37.0 37.0 37.0 37.0 10-11 36.733668981780966 37.0 37.0 37.0 37.0 37.0 12-13 36.716180062667206 37.0 37.0 37.0 37.0 37.0 14-15 39.00981445460815 40.0 40.0 40.0 37.0 40.0 16-17 38.95419802433413 40.0 40.0 40.0 37.0 40.0 18-19 38.98836911629284 40.0 40.0 40.0 37.0 40.0 20-21 39.00736287826004 40.0 40.0 40.0 37.0 40.0 22-23 39.0446734839911 40.0 40.0 40.0 37.0 40.0 24-25 39.047804016694386 40.0 40.0 40.0 37.0 40.0 26-27 38.96218434357744 40.0 40.0 40.0 37.0 40.0 28-29 38.8922308971938 40.0 40.0 40.0 37.0 40.0 30-31 38.80907591255739 40.0 37.0 40.0 37.0 40.0 32-33 38.77159759249037 40.0 37.0 40.0 37.0 40.0 34-35 38.747037651923 40.0 37.0 40.0 37.0 40.0 36-37 38.708059613924306 40.0 37.0 40.0 37.0 40.0 38-39 38.65846705943931 40.0 37.0 40.0 37.0 40.0 40-41 38.60744057165289 40.0 37.0 40.0 37.0 40.0 42-43 38.532591060035 40.0 37.0 40.0 37.0 40.0 44-45 38.44050403856528 40.0 37.0 40.0 37.0 40.0 46-47 38.35282098694083 40.0 37.0 40.0 37.0 40.0 48-49 38.305418408952804 40.0 37.0 40.0 37.0 40.0 50-51 38.253950208812014 40.0 37.0 40.0 37.0 40.0 52-53 38.18257251918119 40.0 37.0 40.0 37.0 40.0 54-55 38.11609288210893 40.0 37.0 40.0 37.0 40.0 56-57 38.011702228569206 40.0 37.0 40.0 37.0 40.0 58-59 37.88366918088253 40.0 37.0 40.0 33.0 40.0 60-61 37.70924464611168 40.0 37.0 40.0 33.0 40.0 62-63 37.515185617917425 37.0 37.0 40.0 33.0 40.0 64-65 37.27758460624129 37.0 37.0 40.0 33.0 40.0 66-67 37.03335129585031 37.0 37.0 40.0 33.0 40.0 68-69 36.7803176661846 37.0 37.0 40.0 33.0 40.0 70-71 36.504687273704896 37.0 37.0 40.0 33.0 40.0 72-73 36.24778809938087 37.0 37.0 37.0 33.0 40.0 74-75 36.00301146701631 37.0 37.0 37.0 33.0 40.0 76-77 34.36223977485332 35.0 33.0 37.0 30.0 37.0 78-79 35.635443287480804 37.0 35.0 37.0 33.0 37.0 80-81 35.77139285406935 37.0 37.0 37.0 33.0 37.0 82-83 35.70917722394472 37.0 37.0 37.0 33.0 37.0 84-85 35.587853275952256 37.0 37.0 37.0 33.0 37.0 86-87 35.474062989645645 37.0 33.0 37.0 33.0 37.0 88-89 35.39433331449814 37.0 33.0 37.0 33.0 37.0 90-91 35.320890435063646 37.0 33.0 37.0 33.0 37.0 92-93 35.23851784083372 37.0 33.0 37.0 33.0 37.0 94-95 35.1872192118563 37.0 33.0 37.0 33.0 37.0 96-97 35.148616899907935 37.0 33.0 37.0 33.0 37.0 98-99 35.104043000709325 37.0 33.0 37.0 33.0 37.0 100 35.044037208724944 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 3.0 19 4.0 20 33.0 21 115.0 22 440.0 23 1402.0 24 3451.0 25 7247.0 26 13312.0 27 22551.0 28 34414.0 29 49201.0 30 68190.0 31 92247.0 32 125825.0 33 172368.0 34 246272.0 35 384891.0 36 776731.0 37 2401023.0 38 3470852.0 39 129464.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.07535540148127 19.97947009495081 14.696294529637802 23.24887997393012 2 14.834481390523568 20.64874199956825 41.55192032236851 22.96485628753967 3 18.133231131889737 25.806752020372286 30.6601955752625 25.399821272475474 4 12.600094459516797 17.89695311802664 38.63266724122455 30.87028518123201 5 13.493039844614204 37.60467987685956 35.14434646151261 13.757933817013623 6 30.111048236401906 37.65057586608662 18.448689674810254 13.789686222701219 7 26.642114280221453 33.1764090591081 22.510145890575256 17.67133077009519 8 24.90129733149984 36.06739568829494 20.7234916538511 18.307815326354117 9 25.793968202897062 16.896209355031733 21.1909894916736 36.118832950397604 10-11 24.361356078728136 26.765626208978784 28.3484626383603 20.52455507393278 12-13 25.259739423705163 24.411199598201858 28.593717754055387 21.73534322403759 14-15 22.29724062526211 25.72968725019647 26.74648879748931 25.22658332705211 16-17 21.611806295395883 28.836741630069962 27.422829419413937 22.12862265512022 18-19 21.452932030189363 27.75824661810939 29.62149425058909 21.167327101112157 20-21 22.412989425691272 26.870035616868844 29.637158695632337 21.07981626180755 22-23 22.201714186741384 26.73945300362713 29.449126414568465 21.609706395063018 24-25 21.864548385213205 26.926666822541563 29.569352678657946 21.639432113587283 26-27 21.756607256072556 27.155050672024807 29.43002925437166 21.658312817530977 28-29 21.659589766888075 27.288699192021244 29.473041870585654 21.57866917050503 30-31 21.996933138368053 27.046651353456834 29.364125364439708 21.592290143735404 32-33 21.800700479795722 27.22198747417902 29.243924129850697 21.73338791617456 34-35 21.93504264908322 27.323447881374573 29.231744495219658 21.509764974322547 36-37 22.013468386694697 27.182443037801484 29.117540776325423 21.6865477991784 38-39 21.824896824589707 27.355930881118702 29.154565104263302 21.664607190028292 40-41 22.104832132978515 27.226206009423876 29.046308200916272 21.62265365668134 42-43 22.02755882199495 27.356562224038093 28.73690386227439 21.878975091692567 44-45 22.12612159827839 27.564625558989082 28.448700845226387 21.860551997506136 46-47 22.212453198923836 27.546598045911907 28.04408723845539 22.196861516708868 48-49 22.276098231678347 27.618058113255238 27.954857538396993 22.150986116669426 50-51 22.215348424026274 27.79127350868722 27.80092884171558 22.19244922557092 52-53 22.388270343950595 27.73525870201889 27.640477834971154 22.235993119059362 54-55 22.34318547391434 27.65797585362427 27.7078962039583 22.29094246850309 56-57 22.38633255769723 27.776273353159386 27.600323068634424 22.237071020508957 58-59 22.302823901278437 27.799180705083426 27.689716485839494 22.208278907798643 60-61 22.382617576244556 27.834342078878844 27.612586469886025 22.170453874990574 62-63 22.368470427944004 27.79963230775597 27.533740180351113 22.298157083948915 64-65 22.278024842017864 27.77708693957234 27.55219425202115 22.392693966388645 66-67 22.377685291407214 27.795785489438842 27.408271526947615 22.418257692206332 68-69 22.37088706137043 27.732964665459704 27.523498981995086 22.37264929117478 70-71 22.335640442204514 27.56183599884634 27.540729148205283 22.561794410743865 72-73 22.416030736586677 27.579384099569538 27.545843213781847 22.458741950061935 74-75 22.35809343028347 27.733132647771747 27.43792501580088 22.4708489061439 76-77 22.403737894981916 27.635166306620818 27.438206266569647 22.522889531827616 78-79 22.38770428888027 27.634269257823778 27.40752314799489 22.570503305301063 80-81 22.40806694033708 27.641464037688102 27.417772635731218 22.532696386243607 82-83 22.51365084572494 27.568141024478038 27.524133849584224 22.3940742802128 84-85 22.605943094742916 27.516434779119447 27.431949831431368 22.44567229470627 86-87 22.4204874997993 27.544021548405546 27.524456415780858 22.511034536014293 88-89 22.536321984928833 27.444924407048454 27.44756597786549 22.571187630157223 90-91 22.577416731518998 27.45611168356864 27.46227594303599 22.504195641876372 92-93 22.597601604887224 27.430632902924142 27.51917562354137 22.452589868647266 94-95 22.440882219099475 27.43594030095597 27.572891390184523 22.550286089760036 96-97 22.55933794371755 27.52800447696649 27.63578752669204 22.27687005262392 98-99 23.651065275268717 29.454306429590808 27.771685448774363 19.122942846366108 100 22.532518656640597 30.407654847623117 21.636493752302176 25.423332743434106 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1567.0 1 1483.0 2 2246.0 3 3311.0 4 4721.5 5 7844.0 6 10397.0 7 12393.5 8 14028.0 9 13996.5 10 12677.5 11 11781.5 12 13603.0 13 18980.0 14 30247.5 15 44698.5 16 56252.0 17 63027.5 18 63836.0 19 59198.0 20 52071.5 21 44705.0 22 39796.5 23 39470.5 24 43662.0 25 51721.0 26 63203.5 27 76353.5 28 88978.0 29 103272.0 30 119860.5 31 136235.5 32 154267.5 33 171906.5 34 188675.5 35 205997.5 36 225260.0 37 243948.5 38 256122.5 39 263765.5 40 273876.5 41 284652.0 42 293797.0 43 304949.0 44 314696.5 45 324199.0 46 331971.0 47 334914.5 48 334588.0 49 328625.5 50 319028.0 51 309616.0 52 297644.5 53 282038.0 54 266425.0 55 247621.0 56 225522.0 57 200898.0 58 177045.5 59 155161.0 60 129145.5 61 105178.0 62 84447.5 63 64466.5 64 48010.5 65 35670.0 66 26566.0 67 20204.0 68 15120.0 69 10723.0 70 7619.0 71 5377.0 72 3627.0 73 2418.5 74 1571.0 75 993.0 76 652.5 77 421.0 78 278.0 79 181.5 80 124.5 81 84.5 82 58.5 83 41.5 84 28.0 85 16.0 86 10.5 87 7.5 88 6.0 89 4.0 90 2.5 91 3.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0018749913281651072 4 0.010537451264287904 5 0.017062421086302477 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.004013409037146914 26-27 0.04285134192294412 28-29 0.08838097907207479 30-31 0.08515006423041098 32-33 0.036162166809941845 34-35 0.003199364602418607 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 1.070963730139898E-4 56-57 2.628430329039714E-4 58-59 2.0362906359613947E-5 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 2.8436301298820952E-5 72-73 0.012882686400715064 74-75 0.026558522253171825 76-77 0.0048632444008526645 78-79 0.0 80-81 0.0 82-83 0.0056598869716823486 84-85 0.04282602093593813 86-87 0.04013866027056758 88-89 0.010796834164334303 90-91 1.718801966903218E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 104.0 20-21 425.0 22-23 974.0 24-25 1679.0 26-27 2975.0 28-29 5799.0 30-31 11985.0 32-33 16314.0 34-35 22748.0 36-37 31562.0 38-39 38671.0 40-41 43318.0 42-43 55268.0 44-45 67512.0 46-47 66039.0 48-49 56380.0 50-51 48747.0 52-53 47208.0 54-55 50512.0 56-57 52283.0 58-59 52822.0 60-61 51963.0 62-63 51733.0 64-65 55606.0 66-67 59351.0 68-69 59771.0 70-71 59505.0 72-73 57511.0 74-75 59080.0 76-77 59664.0 78-79 63462.0 80-81 63604.0 82-83 62733.0 84-85 63899.0 86-87 66844.0 88-89 72546.0 90-91 77010.0 92-93 79934.0 94-95 90339.0 96-97 262269.0 98-99 496534.0 100-101 5413354.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.75264979383313 #Duplication Level Percentage of deduplicated Percentage of total 1 87.96907683063374 72.79674207652235 2 8.215887844432213 13.597729790714194 3 2.150034632411762 5.337631889417498 4 0.7846710862254586 2.597344464070481 5 0.3402169894633539 1.4076928691486572 6 0.18282490701016574 0.9077547302041414 7 0.11007955139523434 0.6376562196250458 8 0.06156374447828328 0.40756503894467233 9 0.041693515496164145 0.3105223997875044 >10 0.14144008851351397 1.7523479216048996 >50 0.00183347400587859 0.10046958403943357 >100 6.002905683138722E-4 0.08355117406641244 >500 5.1363708249374055E-5 0.03153850848774264 >1k 2.5681657720827204E-5 0.031453333366951226 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2499942187767382E-5 2 0.0 0.0 0.0 0.0 1.2499942187767382E-5 3 0.0 0.0 0.0 0.0 1.2499942187767382E-5 4 0.0 0.0 0.0 0.0 1.2499942187767382E-5 5 0.0 0.0 0.0 0.0 1.2499942187767382E-5 6 0.0 0.0 0.0 0.0 1.2499942187767382E-5 7 0.0 0.0 0.0 0.0 1.2499942187767382E-5 8 1.2499942187767382E-5 0.0 0.0 0.0 1.2499942187767382E-5 9 1.2499942187767382E-5 0.0 0.0 2.4999884375534765E-5 3.7499826563302146E-5 10-11 1.2499942187767382E-5 0.0 0.0 2.4999884375534765E-5 3.7499826563302146E-5 12-13 1.2499942187767382E-5 0.0 0.0 3.7499826563302146E-5 3.7499826563302146E-5 14-15 1.2499942187767382E-5 6.249971093883691E-6 0.0 4.999976875106952E-5 4.999976875106953E-5 16-17 1.2499942187767382E-5 1.2499942187767382E-5 0.0 6.249971093883691E-5 6.249971093883691E-5 18-19 1.2499942187767382E-5 1.2499942187767382E-5 0.0 6.249971093883691E-5 8.749959531437168E-5 20-21 1.2499942187767382E-5 1.2499942187767382E-5 0.0 9.374956640825537E-5 8.749959531437168E-5 22-23 1.2499942187767382E-5 1.2499942187767382E-5 0.0 9.999953750213906E-5 1.1249947968990643E-4 24-25 1.2499942187767382E-5 1.2499942187767382E-5 0.0 1.312493929715575E-4 1.312493929715575E-4 26-27 1.2499942187767382E-5 1.2499942187767382E-5 0.0 1.4999930625320858E-4 1.4999930625320858E-4 28-29 1.2499942187767382E-5 1.2499942187767382E-5 0.0 3.2499849688195193E-4 1.7499919062874335E-4 30-31 1.2499942187767382E-5 1.2499942187767382E-5 0.0 8.812459242376004E-4 1.7499919062874335E-4 32-33 1.2499942187767382E-5 1.2499942187767382E-5 0.0 0.0016624923109730618 1.8749913281651073E-4 34-35 1.2499942187767382E-5 1.2499942187767382E-5 0.0 0.002831236905529312 1.8749913281651073E-4 36-37 1.2499942187767382E-5 3.1249855469418453E-5 0.0 0.0045374790141595595 1.8749913281651073E-4 38-39 1.2499942187767382E-5 4.999976875106953E-5 0.0 0.0072874662954683835 1.8749913281651073E-4 40-41 1.2499942187767382E-5 4.999976875106953E-5 0.0 0.010049953518964976 1.8749913281651073E-4 42-43 1.2499942187767382E-5 6.249971093883691E-5 0.0 0.012724941147147194 1.999990750042781E-4 44-45 1.8749913281651073E-5 6.249971093883691E-5 0.0 0.016287424670660897 2.1249901719204548E-4 46-47 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.02003115735589723 2.1249901719204548E-4 48-49 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.023818639838790748 2.1249901719204548E-4 50-51 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.027718621801374167 2.1249901719204548E-4 52-53 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.03163110370614536 2.2499895937981286E-4 54-55 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.036099833038272196 2.3749890156758024E-4 56-57 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.040799811300872735 2.3749890156758024E-4 58-59 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.04498104196268092 2.562488148492313E-4 60-61 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.049087272971362506 2.749987281308824E-4 62-63 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.05346850270817498 2.749987281308824E-4 64-65 2.4999884375534765E-5 6.249971093883691E-5 0.0 0.05752473394810549 2.749987281308824E-4 66-67 2.4999884375534765E-5 8.749959531437168E-5 0.0 0.062005963222420094 2.749987281308824E-4 68-69 2.4999884375534765E-5 8.749959531437168E-5 0.0 0.06676219122486558 2.749987281308824E-4 70-71 2.4999884375534765E-5 8.749959531437168E-5 0.0 0.07103092148198814 2.874986703186498E-4 72-73 3.1249855469418453E-5 9.374956640825537E-5 0.0 0.07438715595940368 3.1249855469418455E-4 74-75 3.7499826563302146E-5 9.999953750213906E-5 0.0 0.07698089396336541 3.1249855469418455E-4 76-77 3.7499826563302146E-5 9.999953750213906E-5 0.0 0.07965588159154763 3.1249855469418455E-4 78-79 3.7499826563302146E-5 9.999953750213906E-5 0.0 0.08149337309314944 3.1249855469418455E-4 80-81 3.7499826563302146E-5 9.999953750213906E-5 0.0 0.08206837043378674 3.374984390697193E-4 82-83 3.7499826563302146E-5 1.0624950859602274E-4 0.0 0.08249961843926472 3.687482945391378E-4 84-85 3.7499826563302146E-5 1.1249947968990643E-4 0.0 0.08267461762989346 3.7499826563302147E-4 86-87 3.7499826563302146E-5 1.1249947968990643E-4 0.0 0.08275586725411395 3.7499826563302147E-4 88 3.7499826563302146E-5 1.1249947968990643E-4 0.0 0.08276211722520783 3.7499826563302147E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13115 0.0 50.77285 1 GTATCAA 23840 0.0 38.532383 1 ATCAACG 29650 0.0 30.472765 3 TCAACGC 29690 0.0 30.430761 4 CAACGCA 30085 0.0 30.014256 5 TATCAAC 30655 0.0 29.76918 2 AACGCAG 30860 0.0 29.396374 6 ACGCAGA 35230 0.0 25.627602 7 CGCAGAG 35730 0.0 25.305176 8 GTGGTAT 6280 0.0 23.143166 1 GCAGAGT 39965 0.0 22.49418 9 TGGTATC 6320 0.0 21.222466 2 GTACATG 25980 0.0 20.932856 1 TACATGG 25895 0.0 20.635164 2 GAGTACT 25770 0.0 20.546028 12-13 CAGAGTA 39110 0.0 19.8109 10-11 ACATGGG 26430 0.0 19.727936 3 AGAGTAC 37095 0.0 19.352757 10-11 GTACTTT 28080 0.0 18.763916 14-15 CATGGGG 18425 0.0 18.701576 4 >>END_MODULE