##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138626_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6918001 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.825571144034235 33.0 33.0 33.0 33.0 33.0 2 32.8217892712071 33.0 33.0 33.0 33.0 33.0 3 32.81844408522057 33.0 33.0 33.0 33.0 33.0 4 36.77011740819349 37.0 37.0 37.0 37.0 37.0 5 36.78405640588951 37.0 37.0 37.0 37.0 37.0 6 36.79184926397091 37.0 37.0 37.0 37.0 37.0 7 36.77829795052068 37.0 37.0 37.0 37.0 37.0 8 36.776632006847066 37.0 37.0 37.0 37.0 37.0 9 36.77531486335431 37.0 37.0 37.0 37.0 37.0 10-11 36.75360302781107 37.0 37.0 37.0 37.0 37.0 12-13 36.73866150062713 37.0 37.0 37.0 37.0 37.0 14-15 39.06600179734001 40.0 40.0 40.0 37.0 40.0 16-17 39.01810421825611 40.0 40.0 40.0 37.0 40.0 18-19 39.04846739686796 40.0 40.0 40.0 37.0 40.0 20-21 39.06443162666099 40.0 40.0 40.0 37.0 40.0 22-23 39.09891282810224 40.0 40.0 40.0 37.0 40.0 24-25 39.10059255733103 40.0 40.0 40.0 37.0 40.0 26-27 39.01930546316586 40.0 40.0 40.0 37.0 40.0 28-29 38.9506071080386 40.0 40.0 40.0 37.0 40.0 30-31 38.87963957611052 40.0 40.0 40.0 37.0 40.0 32-33 38.85320855923455 40.0 40.0 40.0 37.0 40.0 34-35 38.833309124702666 40.0 37.0 40.0 37.0 40.0 36-37 38.801633625792604 40.0 37.0 40.0 37.0 40.0 38-39 38.75824375465196 40.0 37.0 40.0 37.0 40.0 40-41 38.718352984571204 40.0 37.0 40.0 37.0 40.0 42-43 38.653989555754215 40.0 37.0 40.0 37.0 40.0 44-45 38.57080809991635 40.0 37.0 40.0 37.0 40.0 46-47 38.4920389702147 40.0 37.0 40.0 37.0 40.0 48-49 38.45095874523442 40.0 37.0 40.0 37.0 40.0 50-51 38.4043194966319 40.0 37.0 40.0 37.0 40.0 52-53 38.332046604083644 40.0 37.0 40.0 37.0 40.0 54-55 38.26666662176221 40.0 37.0 40.0 37.0 40.0 56-57 38.16344559132568 40.0 37.0 40.0 37.0 40.0 58-59 38.040944407232274 40.0 37.0 40.0 37.0 40.0 60-61 37.87221102696501 40.0 37.0 40.0 35.0 40.0 62-63 37.68395534521614 38.5 37.0 40.0 33.0 40.0 64-65 37.45821935666455 37.0 37.0 40.0 33.0 40.0 66-67 37.22225292425971 37.0 37.0 40.0 33.0 40.0 68-69 36.96858403997103 37.0 37.0 40.0 33.0 40.0 70-71 36.701305568530834 37.0 37.0 40.0 33.0 40.0 72-73 36.450105011822714 37.0 37.0 37.0 33.0 40.0 74-75 36.20656027013327 37.0 37.0 37.0 33.0 40.0 76-77 34.590752180966014 35.0 33.0 37.0 30.0 37.0 78-79 35.80885181132513 37.0 37.0 37.0 33.0 37.0 80-81 35.91884501086811 37.0 37.0 37.0 33.0 37.0 82-83 35.84820039510079 37.0 37.0 37.0 33.0 37.0 84-85 35.72582748720227 37.0 37.0 37.0 33.0 37.0 86-87 35.61307182950756 37.0 37.0 37.0 33.0 37.0 88-89 35.54045672879764 37.0 37.0 37.0 33.0 37.0 90-91 35.47698792301425 37.0 33.0 37.0 33.0 37.0 92-93 35.40520394458422 37.0 33.0 37.0 33.0 37.0 94-95 35.358993820451055 37.0 33.0 37.0 33.0 37.0 96-97 35.324203495280315 37.0 33.0 37.0 33.0 37.0 98-99 35.28162483779538 37.0 33.0 37.0 33.0 37.0 100 35.21855833291545 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 26.0 21 93.0 22 349.0 23 1048.0 24 2516.0 25 5295.0 26 10041.0 27 16410.0 28 25422.0 29 36369.0 30 51382.0 31 70812.0 32 96461.0 33 133303.0 34 192811.0 35 301037.0 36 603838.0 37 1934192.0 38 3288007.0 39 148585.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.65619519280208 20.319222272445465 14.701573474765325 23.323009059987125 2 14.52507740314001 20.85773043397941 41.96911795762967 22.64807420525091 3 18.17291110439744 26.010214097072954 30.394137518809927 25.42273727971968 4 12.46514333644102 18.057952740515496 39.10879702749225 30.36810689555123 5 13.366798194626586 37.69972619264651 35.40725645147463 13.526219161252277 6 29.831305314931296 37.82315151443314 18.81748788414457 13.528055286490998 7 26.468455266196116 32.915534415216186 22.908626350299745 17.70738396828795 8 24.471057462986778 36.521633922862975 21.06792121018774 17.939387403962503 9 25.55732501339621 17.137508364049094 21.426970016338533 35.878196606216164 10-11 24.214574412463946 26.905199926973122 28.599005695431384 20.281219965131548 12-13 25.11904811809076 24.433221388664155 28.880907938579366 21.56682255466572 14-15 22.20130497234678 25.80775140101888 26.84772667711381 25.143216949520536 16-17 21.522662399152587 28.99474862752983 27.445789614658917 22.036799358658666 18-19 21.478364920733604 28.050610284676164 29.470044887244164 21.000979907346068 20-21 22.4270484311367 27.124408576488364 29.380429709087068 21.068113283287868 22-23 22.141529576831758 27.045899130322148 29.217733746026198 21.594837546819896 24-25 21.850041174042207 27.174108721161 29.339906720370053 21.63594338442674 26-27 21.80221249172763 27.41459009373075 29.171534345743055 21.611663068798563 28-29 21.636130749951203 27.562813406132342 29.207439868211445 21.593615975705017 30-31 22.040562465138926 27.30373562795338 29.064864103173484 21.590837803734214 32-33 21.808147715313993 27.519731907693917 28.95255911577797 21.719561261214118 34-35 21.887516356783827 27.593688377297692 29.028434377859018 21.490360888059456 36-37 21.922467954021112 27.489773097572023 28.920847279941693 21.66691166846518 38-39 21.760495870462083 27.617833716722746 28.977448562074027 21.644221850741143 40-41 22.061463622515056 27.44201575885165 28.811071196558895 21.6854494220744 42-43 21.942789916530305 27.575451366066524 28.576394152388062 21.90536456501511 44-45 22.08857391692085 27.731872095728242 28.351477799951656 21.828076187399244 46-47 22.13532229124673 27.678813084257914 28.035136441913444 22.150728182581908 48-49 22.15219132793576 27.844684200936015 27.967755148985518 22.035369322142706 50-51 22.115263863286764 27.94652553235425 27.857612412227915 22.08059819213107 52-53 22.237477034609075 27.890283547231647 27.70355049776881 22.16868892039047 54-55 22.233032267284734 27.77202594653757 27.76635377567341 22.22858801050429 56-57 22.258802698737885 27.882238635673584 27.679809324132993 22.179149341455542 58-59 22.169935565572814 27.97785965249384 27.764263040508 22.087941741425347 60-61 22.305526382294865 27.906122958761674 27.722908737981548 22.065441920961913 62-63 22.248648285148892 27.929377050739845 27.62835447937758 22.19362018473368 64-65 22.199646141090756 27.95908081388707 27.632957865245917 22.208315179776257 66-67 22.291908549989 27.942661923666552 27.48095904504214 22.284470481302314 68-69 22.267826841437838 27.92826318958061 27.55701602698288 22.246893941998678 70-71 22.22297563510934 27.672825093855913 27.61827308521131 22.485926185823438 72-73 22.295104407946194 27.737099592632276 27.592018423092895 22.375777576328634 74-75 22.173497371961112 27.90229277323977 27.544681861677784 22.379527993121336 76-77 22.280421677710052 27.817366761447555 27.43054282970939 22.471668731133008 78-79 22.27898460015463 27.853289726121456 27.40855444918519 22.459171224538725 80-81 22.24141191414055 27.869016526802536 27.451368670434434 22.43820288862248 82-83 22.350652949140475 27.79271427251982 27.588609377147115 22.268023401192586 84-85 22.48960537145861 27.79944864838193 27.440217059308125 22.270728920851337 86-87 22.19757156661971 27.8760692912795 27.56283932518363 22.363519816917158 88-89 22.317807413336705 27.79037392774402 27.490983494692568 22.4008351642267 90-91 22.37645050174822 27.76772354211338 27.522604178782956 22.33322177735544 92-93 22.38014847059768 27.76977112161495 27.545034350868512 22.305046056918865 94-95 22.200198349653853 27.92503153374351 27.553963623058632 22.32080649354401 96-97 22.287982727250007 27.986088889389816 27.617200420841968 22.10872796251821 98-99 23.36012564475206 29.904494212869213 27.83057974781994 18.904800394558787 100 22.303530768134998 30.919993130438677 21.654761054202528 25.121715047223798 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1263.0 1 1238.0 2 1860.0 3 2729.0 4 3924.5 5 6502.5 6 8485.0 7 9711.0 8 10433.5 9 10181.5 10 9486.0 11 8901.5 12 9968.0 13 13446.5 14 21176.5 15 31609.0 16 40405.0 17 45925.0 18 46880.5 19 44053.5 20 39673.0 21 35039.5 22 32192.0 23 33112.5 24 38076.5 25 46610.5 26 57999.0 27 70641.5 28 83999.5 29 99857.5 30 115309.0 31 129657.0 32 145923.5 33 161411.5 34 176889.0 35 192961.0 36 210107.5 37 226526.0 38 237974.0 39 246268.5 40 255841.0 41 265318.0 42 272372.5 43 279497.5 44 285565.0 45 291773.0 46 297430.0 47 299122.5 48 296852.0 49 291376.0 50 284057.0 51 274782.5 52 261813.5 53 246662.5 54 231875.0 55 215082.0 56 196011.0 57 175411.5 58 154776.0 59 135005.0 60 113269.0 61 91740.0 62 72471.5 63 55527.0 64 40850.5 65 29462.5 66 21920.5 67 16568.0 68 12414.5 69 8569.0 70 5697.0 71 3964.5 72 2645.0 73 1660.5 74 1053.5 75 683.5 76 468.5 77 302.0 78 187.5 79 122.5 80 79.5 81 51.5 82 37.0 83 25.5 84 17.5 85 15.0 86 13.0 87 12.0 88 8.5 89 3.5 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0016045097420483172 4 0.010754551784540071 5 0.015813816736944673 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.004120849328735333 26-27 0.04322518142715852 28-29 0.08948334763817438 30-31 0.08543924292323801 32-33 0.036093088783767525 34-35 0.0030398090329274013 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 6.337617060738375E-5 56-57 1.8377207851733965E-4 58-59 1.611988812152848E-5 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 3.4031185327454446E-5 72-73 0.013575363488729314 74-75 0.027321710673568988 76-77 0.005116803951537132 78-79 0.0 80-81 0.0 82-83 0.006226113708478759 84-85 0.04685412197977911 86-87 0.04360365855283832 88-89 0.011658014964246587 90-91 1.503278744897543E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 89.0 20-21 382.0 22-23 958.0 24-25 2125.0 26-27 3392.0 28-29 6887.0 30-31 17079.0 32-33 21557.0 34-35 29202.0 36-37 42703.0 38-39 50910.0 40-41 52497.0 42-43 61523.0 44-45 71224.0 46-47 68541.0 48-49 61212.0 50-51 53063.0 52-53 49988.0 54-55 53343.0 56-57 54359.0 58-59 54160.0 60-61 52928.0 62-63 52084.0 64-65 54226.0 66-67 56279.0 68-69 56355.0 70-71 54874.0 72-73 52670.0 74-75 53663.0 76-77 53809.0 78-79 56047.0 80-81 56805.0 82-83 54802.0 84-85 54481.0 86-87 56423.0 88-89 60103.0 90-91 62554.0 92-93 64037.0 94-95 76816.0 96-97 216211.0 98-99 410802.0 100-101 4506838.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.1294493806191 #Duplication Level Percentage of deduplicated Percentage of total 1 89.68661280771846 76.34971965133853 2 7.289001804355073 12.410174202781729 3 1.6767825158986334 4.282307169284996 4 0.630075930725188 2.145520682024654 5 0.2898012939509595 1.2335312291918061 6 0.14402326832317452 0.7356372918209404 7 0.08496573518061847 0.5063160376501883 8 0.04902658431662816 0.3338884902309641 9 0.0372728331309915 0.2855714185167303 >10 0.1094498087149673 1.4214748705121703 >50 0.0023223534811465923 0.13018319574655027 >100 5.842471987053558E-4 0.10488035201485857 >500 5.3878044768681006E-5 0.02944601300863682 >1k 2.69389607287591E-5 0.031349395877225995 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.445504272115601E-5 2 0.0 5.782017088462404E-5 0.0 0.0 1.445504272115601E-5 3 0.0 5.782017088462404E-5 0.0 0.0 1.445504272115601E-5 4 0.0 8.673025632693607E-5 0.0 0.0 2.891008544231202E-5 5 0.0 8.673025632693607E-5 0.0 0.0 2.891008544231202E-5 6 0.0 8.673025632693607E-5 0.0 0.0 4.3365128163468034E-5 7 0.0 8.673025632693607E-5 0.0 0.0 4.3365128163468034E-5 8 0.0 1.1564034176924809E-4 0.0 0.0 4.3365128163468034E-5 9 0.0 3.035558971442762E-4 0.0 1.445504272115601E-5 4.3365128163468034E-5 10-11 0.0 3.035558971442762E-4 0.0 1.445504272115601E-5 4.3365128163468034E-5 12-13 0.0 3.035558971442762E-4 0.0 1.445504272115601E-5 4.3365128163468034E-5 14-15 0.0 3.9751367483179033E-4 0.0 2.891008544231202E-5 5.782017088462404E-5 16-17 0.0 4.047411961923683E-4 0.0 2.891008544231202E-5 5.782017088462404E-5 18-19 0.0 4.191962389135243E-4 0.0 2.891008544231202E-5 5.782017088462404E-5 20-21 0.0 4.336512816346803E-4 0.0 2.891008544231202E-5 5.782017088462404E-5 22-23 0.0 4.6256136707699234E-4 0.0 2.891008544231202E-5 5.782017088462404E-5 24-25 0.0 4.986989738798823E-4 0.0 5.782017088462404E-5 5.782017088462404E-5 26-27 0.0 5.203815379616163E-4 0.0 8.673025632693607E-5 5.782017088462404E-5 28-29 0.0 5.203815379616163E-4 0.0 4.4810632435583633E-4 5.782017088462404E-5 30-31 0.0 6.071117942885524E-4 0.0 0.0016984675197358311 5.782017088462404E-5 32-33 0.0 6.071117942885524E-4 0.0 0.004531655893082409 5.782017088462404E-5 34-35 0.0 7.082970933366445E-4 0.0 0.007437119480034767 5.782017088462404E-5 36-37 1.445504272115601E-5 8.094823923847366E-4 0.0 0.012200056056655672 5.782017088462404E-5 38-39 1.445504272115601E-5 8.239374351058926E-4 0.0 0.02294015279847459 6.504769224520204E-5 40-41 2.1682564081734017E-5 8.383924778270486E-4 0.0 0.035450992273635115 8.673025632693607E-5 42-43 2.891008544231202E-5 8.528475205482047E-4 0.0 0.04374818679557867 8.673025632693607E-5 44-45 2.891008544231202E-5 9.901704263991866E-4 0.0 0.053519795675080126 8.673025632693607E-5 46-47 2.891008544231202E-5 0.0010985832468078567 0.0 0.06309626147784599 8.673025632693607E-5 48-49 2.891008544231202E-5 0.0010985832468078567 0.0 0.07312806112632825 8.673025632693607E-5 50-51 2.891008544231202E-5 0.0012214511099376828 0.0 0.08295026265535377 8.673025632693607E-5 52-53 2.891008544231202E-5 0.0012286786312982608 0.0 0.1016984530646931 1.0118529904809208E-4 54-55 2.891008544231202E-5 0.0012359061526588389 0.0 0.12476147372629753 1.1564034176924809E-4 56-57 2.891008544231202E-5 0.0012864988021828849 0.0 0.14942900412995025 1.1564034176924809E-4 58-59 2.891008544231202E-5 0.0012864988021828849 0.0 0.1707718747077371 1.1564034176924809E-4 60-61 2.891008544231202E-5 0.0012937263235434629 0.0 0.1809626798261521 1.1564034176924809E-4 62-63 2.891008544231202E-5 0.001322636408985775 0.0 0.1925483965671586 1.2286786312982608E-4 64-65 2.891008544231202E-5 0.001488869400279069 0.0 0.19921217126161156 1.3009538449040408E-4 66-67 2.891008544231202E-5 0.0014960969216396471 0.0 0.20477736270925662 1.3009538449040408E-4 68-69 2.891008544231202E-5 0.001532234528442537 0.0 0.21077620543853637 1.3009538449040408E-4 70-71 2.891008544231202E-5 0.0015539170925242712 0.0 0.21603061346767657 1.445504272115601E-4 72-73 2.891008544231202E-5 0.001568372135245427 0.0 0.21988288235286463 1.445504272115601E-4 74-75 2.891008544231202E-5 0.0016478748702117851 0.0 0.2225570652562785 1.445504272115601E-4 76-77 2.891008544231202E-5 0.0017201500838175652 0.0 0.22544084627914912 1.445504272115601E-4 78-79 2.891008544231202E-5 0.0017346051265387213 0.0 0.22757296508051963 1.445504272115601E-4 80-81 2.891008544231202E-5 0.0017346051265387213 0.0 0.22833908234474093 1.445504272115601E-4 82-83 3.613760680289003E-5 0.0017346051265387213 0.0 0.2287799611477362 1.445504272115601E-4 84-85 4.3365128163468034E-5 0.0017346051265387213 0.0 0.22897510422447176 1.445504272115601E-4 86-87 4.3365128163468034E-5 0.0017707427333416112 0.0 0.2290690620021593 1.445504272115601E-4 88 4.3365128163468034E-5 0.0018791555537502813 0.0 0.22908351704488045 1.445504272115601E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10120 0.0 46.918453 1 GTATCAA 17860 0.0 37.366425 1 ATCAACG 21860 0.0 29.8321 3 TCAACGC 22095 0.0 29.591208 4 CAACGCA 22400 0.0 29.12993 5 TATCAAC 22770 0.0 28.93723 2 AACGCAG 22935 0.0 28.484854 6 ACGCAGA 26125 0.0 24.97431 7 CGCAGAG 26340 0.0 24.754393 8 GTGGTAT 5275 0.0 21.420034 1 GCAGAGT 31095 0.0 20.91456 9 TGGTATC 5180 0.0 20.015558 2 GAGTACT 18255 0.0 19.435095 12-13 AGAGTAC 28145 0.0 18.619164 10-11 CAGAGTA 30110 0.0 18.422874 10-11 GTACATG 21350 0.0 18.21583 1 TACATGG 21085 0.0 17.943008 2 GTACTTT 20410 0.0 17.22817 14-15 AGTACTT 19810 0.0 17.215357 12-13 TATACCG 600 0.0 16.926342 5 >>END_MODULE