##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138612_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9154205 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79989655027389 31.0 31.0 34.0 30.0 34.0 2 32.01206538415952 31.0 31.0 34.0 30.0 34.0 3 32.028707790572746 31.0 31.0 34.0 30.0 34.0 4 35.771387466197226 37.0 35.0 37.0 35.0 37.0 5 35.62915774772359 37.0 35.0 37.0 33.0 37.0 6 35.62875574667598 37.0 35.0 37.0 33.0 37.0 7 35.501321523824295 37.0 35.0 37.0 33.0 37.0 8 35.47888068925701 37.0 35.0 37.0 33.0 37.0 9 37.02806447965716 39.0 37.0 39.0 33.0 39.0 10-11 36.95552022267363 39.0 37.0 39.0 33.0 39.0 12-13 36.894557146142134 39.0 37.0 39.0 33.0 39.0 14-15 37.995924714379896 40.0 37.0 41.0 33.0 41.0 16-17 38.04471354967471 40.0 37.0 41.0 33.0 41.0 18-19 38.085449528386135 40.0 37.0 41.0 33.0 41.0 20-21 38.06901067349209 40.0 37.0 41.0 33.0 41.0 22-23 38.01183917950736 40.0 37.0 41.0 33.0 41.0 24-25 37.92469525685232 40.0 37.0 41.0 33.0 41.0 26-27 37.78186018534524 39.5 37.0 41.0 32.5 41.0 28-29 37.65136660874347 39.0 37.0 41.0 32.0 41.0 30-31 37.508508237507115 39.0 36.0 41.0 32.0 41.0 32-33 37.71498258675234 39.5 37.0 41.0 33.0 41.0 34-35 37.71431427418973 40.0 37.0 41.0 33.0 41.0 36-37 37.60366044873622 39.5 36.5 41.0 32.0 41.0 38-39 37.494537125741715 39.0 36.0 41.0 32.0 41.0 40-41 37.483068509451996 39.0 36.0 41.0 32.0 41.0 42-43 37.417168523300646 39.0 36.0 41.0 32.0 41.0 44-45 37.38569984054992 39.0 36.0 41.0 31.5 41.0 46-47 37.39984776209636 39.0 36.0 41.0 31.5 41.0 48-49 37.32893814539297 39.0 36.0 41.0 31.0 41.0 50-51 37.26072927883622 39.0 36.0 41.0 31.0 41.0 52-53 37.15273785494014 39.0 36.0 40.0 31.0 41.0 54-55 37.054787137575 39.0 35.5 40.0 31.0 41.0 56-57 36.895246443248155 39.0 35.0 40.0 31.0 41.0 58-59 36.76228684974653 38.5 35.0 40.0 31.0 41.0 60-61 36.61737781774486 38.0 35.0 40.0 30.5 41.0 62-63 36.40862193716998 38.0 35.0 40.0 30.0 41.0 64-65 36.20705154474988 38.0 34.0 40.0 30.0 41.0 66-67 35.96775474565593 37.5 34.0 40.0 29.5 41.0 68-69 35.70412412957688 37.0 34.0 39.5 29.0 41.0 70-71 35.438705208124375 36.5 34.0 39.0 29.0 41.0 72-73 35.141300078161805 36.0 34.0 39.0 29.0 40.0 74-75 34.82060671097238 35.5 33.5 38.5 29.0 40.0 76-77 33.75013749616406 35.0 32.0 37.0 27.5 39.0 78-79 34.107801028042545 35.0 33.0 37.0 29.0 39.0 80-81 34.0126230633806 35.0 33.0 37.0 29.0 39.0 82-83 33.78358505689161 35.0 33.0 36.0 29.0 38.5 84-85 33.51637318938266 35.0 33.0 36.0 29.0 37.0 86-87 33.311228424550166 35.0 33.0 35.5 29.0 37.0 88-89 33.090222678754394 34.5 32.0 35.0 29.0 36.5 90-91 32.96736025661639 34.0 32.0 35.0 29.0 36.0 92-93 32.9001685803366 34.0 32.0 35.0 29.0 36.0 94-95 32.86181474229379 34.0 32.0 35.0 29.0 36.0 96-97 32.751784416653734 34.0 32.0 35.0 29.0 35.0 98-99 32.86046311824184 34.0 32.0 35.0 29.0 35.0 100-101 32.40390080922448 34.0 31.0 35.0 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 53.0 21 313.0 22 1569.0 23 5282.0 24 14064.0 25 29659.0 26 54532.0 27 87949.0 28 129808.0 29 177177.0 30 232763.0 31 298597.0 32 379264.0 33 486006.0 34 635421.0 35 841615.0 36 1181154.0 37 1703517.0 38 1909823.0 39 950067.0 40 35567.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.85762990887794 23.730274775362798 16.170371976594364 23.241723339164896 2 13.315696311858256 23.346239741066356 42.46711029052144 20.870953656553947 3 15.926746233015319 29.124375082270937 32.74343320910991 22.205445475603835 4 11.262092120506368 20.12928484778307 41.26542938463798 27.34319364707257 5 11.553051302652715 39.43283988068871 37.277513448737494 11.736595367921081 6 27.040840793930222 41.47510351800074 19.588833765466255 11.895221922602781 7 23.930095513482602 34.21257225504563 25.51690725737516 16.340424974096603 8 22.698759750300546 39.13257350037496 22.036473948311187 16.132192801013304 9 24.676834307293753 17.145246364921913 22.39229949515004 35.78561983263429 10-11 22.878327500858894 28.061087773323845 30.644348690028245 18.416236035789016 12-13 23.68832902771966 25.526826157076894 30.638117672402565 20.146727142800884 14-15 20.934570506122597 27.036159884992745 27.958528348447516 24.070741260437142 16-17 20.3960201896287 30.1746629008199 28.553129408834522 20.876187500716885 18-19 20.4641680004859 29.412674931320872 30.136072502087575 19.987084566105654 20-21 21.443009135765987 28.509931468782423 29.8079907842131 20.239068611238487 22-23 21.07419589686883 28.367605485999054 29.766441174415604 20.791757442716513 24-25 20.7883462589071 28.6108859818452 29.810705825007343 20.79006193424035 26-27 20.860737808842696 28.709262254018398 29.689867967107798 20.74013197003111 28-29 20.842068948883885 28.762108198926313 29.696385871100407 20.6994369810894 30-31 21.191605975606546 28.655983521519563 29.447705557878727 20.704704944995164 32-33 21.0314750537644 28.850034972038014 29.41374810834564 20.70474186585195 34-35 20.986774651470384 28.791630003006514 29.48367287828913 20.737922467233975 36-37 21.025533356291536 28.64696913243056 29.588950931625153 20.73854657965275 38-39 20.87656416853003 28.791033995376324 29.648381156631988 20.684020679461657 40-41 21.080464389538236 28.693894028081264 29.51040693480225 20.71523464757825 42-43 21.095743586444524 28.814495118575994 29.168529785769408 20.921231509210074 44-45 21.09866310844764 28.98407132424391 28.9987521841644 20.91851338314405 46-47 21.27519955136427 28.76504673481944 28.745772315050733 21.213981398765558 48-49 21.154609071323918 28.87623335263683 28.87068904231534 21.098468533723914 50-51 21.060459147948574 28.963990347264616 28.734945603354927 21.24060490143188 52-53 21.255825972856993 28.897244586205833 28.589863787893716 21.257065653043462 54-55 21.31370361325687 28.76002736806875 28.640345024074154 21.28592399460022 56-57 21.387066244453617 28.882505117701466 28.540380046851467 21.190048590993445 58-59 21.307927482009536 28.92751957296212 28.558716158979824 21.205836786048522 60-61 21.337804264777454 28.978925074401314 28.514485382227413 21.16878527859382 62-63 21.35815904911171 28.97631995675793 28.404242187640033 21.261278806490328 64-65 21.285425650745584 28.917455104157636 28.455154848874486 21.341964396222295 66-67 21.43627399649652 28.928191187296036 28.283606009699046 21.351928806508393 68-69 21.329010846252963 28.94181515388868 28.34450356802718 21.38467043183118 70-71 21.38337259482456 28.530161423941202 28.508755204194493 21.577710777039748 72-73 21.446777257465232 28.679854440010082 28.448511665353177 21.424856637171512 74-75 21.16653220425346 28.87420632250906 28.440048053539385 21.51921341969809 76-77 21.360434797805038 28.824074656600608 28.38970326098354 21.425787284610813 78-79 21.34374568269984 28.893155464528547 28.246693094427172 21.51640575834444 80-81 21.454866433748666 28.772864416062067 28.256592264803803 21.515676885385464 82-83 21.390099376731072 28.709481231125356 28.431746783275386 21.468672608868186 84-85 21.559990459129434 28.64881854231384 28.31897148163446 21.472219516922266 86-87 21.265750850658964 28.806226965224596 28.373633059525567 21.554389124590877 88-89 21.483801811340722 28.700003977512562 28.28782267570662 21.5283715354401 90-91 21.462691740316806 28.690434984538854 28.451435684811592 21.395437590332747 92-93 21.480486184867047 28.741677389130793 28.2322694295863 21.545566996415864 94-95 21.239817462370546 28.731552835809094 28.36554882428698 21.663080877533382 96-97 21.18680791103988 28.8494440161362 28.44161616577673 21.52213190704719 98-99 21.312196382771443 29.505839833696733 28.512341301663252 20.669622481868572 100-101 24.942977801629905 36.576344289620785 29.402186757849336 9.078491150899971 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2326.0 1 2066.0 2 2675.5 3 3692.0 4 4570.5 5 6497.0 6 8107.5 7 9449.0 8 10394.0 9 10274.5 10 9588.5 11 8963.5 12 9942.5 13 13261.0 14 21198.0 15 32588.5 16 41915.0 17 46770.0 18 48103.0 19 47303.5 20 45240.5 21 43526.5 22 44212.0 23 50161.5 24 62399.0 25 82202.5 26 109800.5 27 140893.0 28 177947.0 29 219267.5 30 255062.0 31 290044.0 32 326875.5 33 362296.0 34 395646.5 35 419973.5 36 437016.0 37 444928.5 38 435933.5 39 417156.0 40 403114.0 41 388032.5 42 370108.5 43 356485.0 44 342601.0 45 329187.0 46 317998.5 47 309133.5 48 300116.5 49 289464.0 50 279782.0 51 271047.5 52 258071.0 53 242794.0 54 227507.0 55 210425.0 56 193004.5 57 174568.0 58 155150.0 59 135429.5 60 114506.0 61 93942.0 62 75180.0 63 58602.5 64 44293.5 65 33266.5 66 25419.0 67 19644.0 68 15164.5 69 11342.5 70 8288.5 71 5987.0 72 4435.0 73 3264.0 74 2378.0 75 1688.5 76 1187.0 77 812.5 78 561.5 79 373.0 80 240.5 81 165.5 82 123.5 83 92.0 84 70.0 85 53.5 86 46.0 87 41.0 88 30.5 89 17.5 90 7.5 91 4.0 92 2.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.003867075294905456 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 7.701378765277815E-4 14-15 0.0 16-17 0.0 18-19 4.478816019523268E-4 20-21 0.0 22-23 0.0013820730593317955 24-25 2.1309297902345498E-4 26-27 0.004930253043870999 28-29 3.390779147998923E-4 30-31 0.0 32-33 0.0 34-35 1.7069910257975352E-4 36-37 0.021754464354131697 38-39 0.008766155040123968 40-41 0.013849569626730781 42-43 0.0017570493813060715 44-45 0.0028169967276460576 46-47 0.0 48-49 7.384544839219997E-4 50-51 3.5558579351784877E-5 52-53 2.9943956890284147E-5 54-55 0.004345294007252526 56-57 0.008889710105451431 58-59 0.012395633415008161 60-61 0.006364878125451749 62-63 0.007112011641072852 64-65 9.391943693625019E-4 66-67 1.3032305325540796E-4 68-69 6.606478563925971E-6 70-71 1.3404001912214913E-4 72-73 6.799199380674527E-6 74-75 1.8611475049697807E-4 76-77 6.291282610077E-5 78-79 2.1287145714486018E-5 80-81 0.0021637695115210988 82-83 0.0024273948597017107 84-85 0.010021231599677652 86-87 0.011100822195344332 88-89 0.04434962917669336 90-91 4.6349450503696765E-4 92-93 7.139345341284372E-4 94-95 1.640905408941113E-5 96-97 0.009697188617070343 98-99 9.720160124615987E-5 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 206.0 20-21 765.0 22-23 1540.0 24-25 3102.0 26-27 4453.0 28-29 8009.0 30-31 20538.0 32-33 26856.0 34-35 37866.0 36-37 60798.0 38-39 72619.0 40-41 75715.0 42-43 84933.0 44-45 100065.0 46-47 101344.0 48-49 95582.0 50-51 89747.0 52-53 85529.0 54-55 92891.0 56-57 99400.0 58-59 100752.0 60-61 100797.0 62-63 94456.0 64-65 96690.0 66-67 104844.0 68-69 106800.0 70-71 108595.0 72-73 101042.0 74-75 100134.0 76-77 103788.0 78-79 113070.0 80-81 116035.0 82-83 108078.0 84-85 106588.0 86-87 111717.0 88-89 121959.0 90-91 130764.0 92-93 135148.0 94-95 161467.0 96-97 206642.0 98-99 707477.0 100-101 5055404.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.77787573347979 #Duplication Level Percentage of deduplicated Percentage of total 1 90.04411752732004 77.23793123789308 2 6.9968616129197425 12.003518519147693 3 1.6788288946069139 4.320191288981013 4 0.6048840600870066 2.0754267895722385 5 0.26508806380742767 1.1369345497851144 6 0.1486450197307625 0.7650272418519598 7 0.08043015364100388 0.4829389406969903 8 0.04807823729481829 0.3299239251327742 9 0.03593361593313982 0.27740783179507106 >10 0.09530780998124187 1.1906998040348769 >50 0.0012865193918473383 0.06975939922383378 >100 4.6022532400631394E-4 0.059726269358058914 >500 5.869620241396678E-5 0.029218634457593772 >1k 1.9563759738733204E-5 0.02129556806969115 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0923941511032361E-5 2 0.0 3.277182453309709E-5 0.0 0.0 1.0923941511032361E-5 3 0.0 3.277182453309709E-5 0.0 0.0 1.0923941511032361E-5 4 0.0 1.0923941511032361E-4 0.0 1.0923941511032361E-5 1.0923941511032361E-5 5 0.0 1.0923941511032361E-4 0.0 1.0923941511032361E-5 1.0923941511032361E-5 6 2.1847883022064722E-5 1.0923941511032361E-4 0.0 2.1847883022064722E-5 2.1847883022064722E-5 7 2.1847883022064722E-5 1.0923941511032361E-4 0.0 2.1847883022064722E-5 2.1847883022064722E-5 8 2.1847883022064722E-5 1.3108729813238835E-4 0.0 2.1847883022064722E-5 2.1847883022064722E-5 9 2.1847883022064722E-5 2.1847883022064723E-4 0.0 1.2016335662135598E-4 2.1847883022064722E-5 10-11 2.1847883022064722E-5 2.1847883022064723E-4 0.0 1.2016335662135598E-4 2.1847883022064722E-5 12-13 2.1847883022064722E-5 2.294027717316796E-4 0.0 1.2016335662135598E-4 2.1847883022064722E-5 14-15 2.1847883022064722E-5 2.676365670202929E-4 0.0 1.3108729813238835E-4 3.277182453309709E-5 16-17 2.1847883022064722E-5 2.8402247928684143E-4 0.0 1.4201123964342071E-4 3.277182453309709E-5 18-19 3.277182453309709E-5 3.4410415759751937E-4 0.0 1.5293518115445305E-4 4.3695766044129444E-5 20-21 3.277182453309709E-5 4.151097774192297E-4 0.0 1.638591226654854E-4 4.3695766044129444E-5 22-23 3.823379528861327E-5 4.4241963119681063E-4 0.0 2.0209291795409868E-4 4.9157736799645625E-5 24-25 4.3695766044129444E-5 5.13425251018521E-4 0.0 2.1847883022064723E-4 5.4619707555161806E-5 26-27 4.3695766044129444E-5 5.571210170626505E-4 0.0 3.167943038199385E-4 5.4619707555161806E-5 28-29 4.3695766044129444E-5 5.571210170626505E-4 0.0 9.285350284377507E-4 5.4619707555161806E-5 30-31 4.3695766044129444E-5 5.898928415957475E-4 0.0 0.00296038814948977 5.4619707555161806E-5 32-33 4.3695766044129444E-5 5.898928415957475E-4 0.0 0.008487902554072144 5.4619707555161806E-5 34-35 4.3695766044129444E-5 6.554364906619417E-4 0.0 0.01585610110326347 5.4619707555161806E-5 36-37 4.3695766044129444E-5 7.264421104836521E-4 0.0 0.025534713282038143 5.4619707555161806E-5 38-39 4.3695766044129444E-5 7.482899935057168E-4 0.0 0.04000347381340051 5.4619707555161806E-5 40-41 4.3695766044129444E-5 7.919857595498462E-4 0.0 0.055985200244040856 6.554364906619418E-5 42-43 4.3695766044129444E-5 8.192956133274271E-4 0.0 0.0697712144309637 6.554364906619418E-5 44-45 4.9157736799645625E-5 8.793772916381051E-4 0.0 0.08384671306792889 6.554364906619418E-5 46-47 5.4619707555161806E-5 9.394589699487831E-4 0.0 0.09766549907938482 6.554364906619418E-5 48-49 5.4619707555161806E-5 9.613068529708479E-4 0.0 0.10884615321592644 6.554364906619418E-5 50-51 5.4619707555161806E-5 0.0011579378001694302 0.0 0.11996126370340188 6.554364906619418E-5 52-53 5.4619707555161806E-5 0.001179785683191495 0.0 0.12956887026235483 6.554364906619418E-5 54-55 6.0081678310677995E-5 0.001179785683191495 0.0 0.13868489945331136 7.100561982171036E-5 56-57 6.554364906619418E-5 0.0011907096247025274 0.0 0.14729842733476037 8.19295613327427E-5 58-59 6.554364906619418E-5 0.0011961715954580435 0.0 0.15567162850296667 8.739153208825889E-5 60-61 6.554364906619418E-5 0.0012016335662135597 0.0 0.16393012828530712 8.739153208825889E-5 62-63 7.646759057722652E-5 0.001207095536969076 0.0 0.17150041975245256 8.739153208825889E-5 64-65 7.646759057722652E-5 0.0014091884549231747 0.0 0.17952951676306134 8.739153208825889E-5 66-67 9.831547359929125E-5 0.001420112396434207 0.0 0.18750399406611495 8.739153208825889E-5 68-69 9.831547359929125E-5 0.0014528842209673041 0.0 0.19604651632774228 8.739153208825889E-5 70-71 9.831547359929125E-5 0.0014692701332338527 0.0 0.20468189209221335 8.739153208825889E-5 72-73 9.831547359929125E-5 0.0014747321039893688 0.0 0.21184253575269507 1.2016335662135598E-4 74-75 9.831547359929125E-5 0.0014911180162559172 0.0 0.21784524161300733 1.2016335662135598E-4 76-77 9.831547359929125E-5 0.0015457377238110792 0.0 0.22325805463172388 1.2016335662135598E-4 78-79 9.831547359929125E-5 0.0015511996945665953 0.0 0.22759485941160373 1.2016335662135598E-4 80-81 9.831547359929125E-5 0.0015511996945665953 0.0 0.23047331799976076 1.3108729813238835E-4 82-83 9.831547359929125E-5 0.0015511996945665953 0.0 0.23229215426134764 1.4201123964342071E-4 84-85 9.831547359929125E-5 0.0015675856068331439 0.0 0.23418745811351177 1.4201123964342071E-4 86-87 9.831547359929125E-5 0.00157304757758866 0.0 0.23451517635884273 1.4201123964342071E-4 88-89 9.831547359929125E-5 0.0016713630511879514 0.0 0.23458072000790894 1.4201123964342071E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9990 0.0 48.38421 1 GTATCAA 18575 0.0 34.50305 1 TCAACGC 22800 0.0 27.25615 4 ATCAACG 22980 0.0 27.078642 3 CAACGCA 23420 0.0 26.587559 5 AACGCAG 23820 0.0 26.1758 6 TATCAAC 24515 0.0 25.687548 2 ACGCAGA 27440 0.0 22.678242 7 CGCAGAG 27755 0.0 22.420858 8 GTACATG 27225 0.0 19.819706 1 TACATGG 26570 0.0 19.763634 2 ACATGGG 26535 0.0 19.04112 3 GCAGAGT 32525 0.0 18.853016 9 AGAGTAC 30120 0.0 18.333523 10-11 CATGGGG 17825 0.0 17.721651 4 GAGTACT 17560 0.0 17.259827 12-13 CAGAGTA 32555 0.0 16.530403 10-11 AGTACTT 20155 0.0 15.919738 12-13 GTACTTT 20215 0.0 15.003263 14-15 TATACAG 9705 0.0 14.996416 5 >>END_MODULE