SRR2132789_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132789_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1871768
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	137751	7.359405652837317	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32547	1.7388372918011208	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	14192	0.7582136247654624	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	11188	0.597723649512119	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4448	0.23763628825794653	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3847	0.20552760812237414	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3695	0.1974069435955738	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3643	0.1946288215206158	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3187	0.1702668279402148	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2715	0.14505002756751906	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGAACAAGCGAATAAGTGCA	2196	0.1173222322424574	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2790	88.09431	1
AACGTGT	1295	73.081566	1
ATCGAGT	910	72.43829	1
CGTGTGG	1445	69.30526	3
GTGGAAT	49925	68.416695	6
TGGAATC	50405	67.69655	7
ACGAGTG	46420	67.245544	2
AACGAGT	42645	67.21839	1
GAATCAC	50860	67.11507	9
GGAATCA	50865	67.10847	8
CGAGTGG	48220	66.80072	3
ACGTGTG	1485	66.17376	2
TCGAGTG	1080	66.17376	2
GAGTGGA	50065	66.108604	4
AGTGGAA	50095	66.097176	5
GCGAGTG	590	56.58122	2
AGCGAGT	615	52.82695	1
ATGAGTG	1885	49.88668	2
TGAGTGG	2040	49.321693	3
AATGAGT	1770	49.21302	1