SRR2132784_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132784_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2227864
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	181648	8.153459995762757	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	31501	1.4139552504102584	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15021	0.6742332566081233	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	7698	0.3455327614252935	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6374	0.28610364007856853	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5109	0.22932279528732452	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4446	0.1995633485706488	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3897	0.17492091079168207	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	2932	0.13160587899440898	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2907	0.13048372791157808	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3570	88.47502	1
AACGAGT	44525	81.53226	1
ACGAGTG	49145	80.56857	2
CGAGTGG	51155	79.84955	3
GTGGAAT	54405	79.690155	6
TGGAATC	54670	79.29142	7
GGAATCA	55045	78.687935	8
GAATCAC	55080	78.64647	9
GAGTGGA	53495	78.37792	4
AGTGGAA	53870	77.80614	5
AACGTGT	1750	75.85382	1
TCGAGTG	1265	73.21591	2
ATCGAGT	1215	72.83631	1
CGTGTGG	2000	72.395485	3
ACGTGTG	1940	70.763756	2
AGCGAGT	710	53.03933	1
GTGTGGA	2895	51.637993	4
TGAGTGG	2510	49.819424	3
ATGAGTG	2420	49.539837	2
GCGAGTG	785	49.11046	2