SRR2132782_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132782_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3778582
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	321783	8.515972393876856	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	30951	0.8191168009586666	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	25284	0.6691399048637823	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10755	0.2846305836422235	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8940	0.23659669156313134	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	8659	0.22916003940102397	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7426	0.19652875073241763	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6087	0.161092176906575	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	5555	89.31735	1
AACGAGT	73145	85.13765	1
ACGAGTG	80170	84.01177	2
CGAGTGG	83670	83.12275	3
GTGGAAT	89395	82.513145	6
TGGAATC	90055	81.81713	7
GAGTGGA	87425	81.600204	4
GGAATCA	90665	81.286316	8
AGTGGAA	87835	81.12298	5
GAATCAC	91060	81.01113	9
ATCGAGT	2090	79.732666	1
AACGTGT	3125	73.81172	1
CGTGTGG	3495	71.156166	3
ACGTGTG	3435	69.52869	2
TCGAGTG	2490	68.91608	2
GCGAGTG	1220	50.482227	2
ATGAGTG	3850	50.188957	2
TGAGTGG	4200	50.14559	3
GTGTGGA	5370	48.933594	4
TGTGGAA	5690	45.76854	5