SRR2132781_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132781_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2119125
Sequences flagged as poor quality	0
Sequence length	100
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	166733	7.868011561375568	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	84202	3.9734324308381996	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	13096	0.6179909160620539	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	9549	0.45061051141390907	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6786	0.32022650858255175	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5623	0.2653453666017814	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4540	0.21423936766354038	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3863	0.1822922196661358	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3860	0.18215065180204093	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	2399	0.11320710198784877	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2840	87.01753	1
AACGAGT	42195	75.246574	1
ACGAGTG	46070	74.397835	2
GTGGAAT	50260	74.27584	6
CGAGTGG	47740	74.00742	3
TGGAATC	50500	73.86933	7
GGAATCA	51030	73.10788	8
GAATCAC	51085	73.04757	9
GAGTGGA	49665	72.954475	4
AGTGGAA	49870	72.61688	5
AACGTGT	1375	72.57698	1
TCGAGTG	1120	71.35466	2
CGTGTGG	1525	71.20542	3
ATCGAGT	1085	70.716965	1
ACGTGTG	1590	65.63678	2
AGCGAGT	580	57.623035	1
GCGAGTG	610	56.258022	2
TGAGTGG	2085	49.14975	3
ATGAGTG	1935	47.860435	2
GTGTGGA	2645	44.429863	4