SRR2132779_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132779_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1123612
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	93650	8.334727646198154	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	25509	2.270267672470568	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	13749	1.223643036920218	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7448	0.6628622691818884	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3041	0.2706450269310047	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2553	0.2272136645034051	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2198	0.19561912831119638	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2130	0.1895672171532522	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2080	0.1851172824782932	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	1550	0.13794797492372812	No Hit
CACTCGTTCCCATGTACTCAGCAGTGATTCCACTCGTTCCCATGTACTCA	1155	0.10279349099155223	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	1795	87.60783	1
AACGTGT	915	76.67011	1
ATCGAGT	715	75.72734	1
CGTGTGG	1045	72.416145	3
TCGAGTG	810	71.38132	2
ACGTGTG	1025	69.70825	2
GTGGAAT	36430	64.02114	6
TGGAATC	36730	63.479786	7
GGAATCA	37040	62.89775	8
GAATCAC	37125	62.69044	9
AGTGGAA	36090	62.462322	5
ACGAGTG	34470	61.639862	2
CGAGTGG	35795	61.506405	3
GAGTGGA	36885	61.052322	4
AACGAGT	32115	60.97361	1
AGCGAGT	380	59.47282	1
TGAGTGG	1110	54.625137	3
GCGAGTG	435	54.031273	2
GTGTGGA	1585	50.41334	4
AATGAGT	1080	50.1343	1