SRR2132775_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132775_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2739637
Sequences flagged as poor quality	0
Sequence length	100
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	242324	8.845113421960647	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	65407	2.387433079637923	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	21301	0.7775117652448116	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	19064	0.6958586119255945	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7988	0.2915714746150676	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	7569	0.2762774776366358	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6727	0.245543478935348	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGAACAAGCGAATAAGTGCA	5532	0.2019245615386272	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5531	0.20188806035252113	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5365	0.1958288634589181	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3358	0.12257098294409076	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	4730	87.192276	1
AACGTGT	2165	78.06774	1
CGTGTGG	2435	74.71442	3
GTGGAAT	77820	74.32777	6
TCGAGTG	1640	74.24312	2
TGGAATC	78260	73.78363	7
GGAATCA	78670	73.4575	8
GAATCAC	79045	73.12684	9
ACGAGTG	72975	72.66668	2
CGAGTGG	75250	72.50508	3
AACGAGT	67460	72.3645	1
AGTGGAA	77260	72.34763	5
ATCGAGT	1615	72.296	1
GAGTGGA	77660	72.02343	4
ACGTGTG	2475	70.279205	2
GCGAGTG	835	57.42672	2
AGCGAGT	805	57.3146	1
GTGTGGA	3675	54.745335	4
TGAGTGG	2965	54.22428	3
ATGAGTG	3075	48.004818	2