SRR2132769_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132769_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1791473
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	116947	6.527980047703761	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	54309	3.0315276869927708	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9418	0.5257126398220905	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	5596	0.31236864859252694	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4455	0.24867804315219935	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4089	0.2282479278225237	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3281	0.18314537813296655	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3053	0.17041842104234894	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2819	0.15735654402829405	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	2249	0.12553915130175	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2370	85.22469	1
AACGAGT	28835	80.31809	1
ACGAGTG	32160	78.48794	2
GTGGAAT	35850	77.38392	6
CGAGTGG	33845	77.32212	3
TGGAATC	36000	77.0899	7
GAATCAC	36175	76.79492	9
GGAATCA	36275	76.596176	8
GAGTGGA	35410	75.87856	4
AGTGGAA	35520	75.471535	5
AACGTGT	1100	74.47544	1
ATCGAGT	885	72.88427	1
ACGTGTG	1245	70.615135	2
TCGAGTG	970	68.824356	2
CGTGTGG	1360	67.40199	3
AGCGAGT	590	51.07219	1
GCGAGTG	695	45.99913	2
GTGTGGA	2155	45.370007	4
TGAGTGG	1760	43.80344	3
ATGAGTG	1610	43.801693	2