Basic Statistics
Measure | Value |
---|---|
Filename | SRR2132768_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3703039 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 225932 | 6.101258992951466 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 206223 | 5.569020472104128 | No Hit |
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG | 21776 | 0.588057538686468 | No Hit |
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 18219 | 0.4920012994732164 | No Hit |
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 16272 | 0.43942286322126234 | No Hit |
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 8068 | 0.21787510204456395 | No Hit |
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 7322 | 0.19772948651094413 | No Hit |
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC | 6994 | 0.18887189683932576 | No Hit |
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 6263 | 0.16913135400410312 | No Hit |
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5184 | 0.13999312456606589 | No Hit |
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA | 5165 | 0.13948003248142946 | No Hit |
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 5136 | 0.1386968919311949 | No Hit |
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 4765 | 0.1286780938575046 | No Hit |
AACGAGTGGAATCACTGCTGAGTACATGGGGGAACAAGCGAATAAGTGCA | 4611 | 0.12451934748729354 | No Hit |
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 4174 | 0.11271822954065566 | No Hit |
AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 4109 | 0.11096291451426787 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TACGAGT | 4865 | 0.0 | 85.25427 | 1 |
AACGTGT | 2040 | 0.0 | 71.31016 | 1 |
CGTGTGG | 2310 | 0.0 | 69.19109 | 3 |
GTGGAAT | 80930 | 0.0 | 67.93407 | 6 |
ACGTGTG | 2265 | 0.0 | 67.66193 | 2 |
AACGAGT | 69305 | 0.0 | 67.35891 | 1 |
TGGAATC | 81830 | 0.0 | 67.09077 | 7 |
GGAATCA | 82070 | 0.0 | 66.943405 | 8 |
GAATCAC | 82250 | 0.0 | 66.8369 | 9 |
ATCGAGT | 1515 | 0.0 | 66.81114 | 1 |
ACGAGTG | 76200 | 0.0 | 66.7648 | 2 |
CGAGTGG | 78635 | 0.0 | 66.41733 | 3 |
GAGTGGA | 81740 | 0.0 | 65.312256 | 4 |
AGTGGAA | 81715 | 0.0 | 65.29772 | 5 |
TCGAGTG | 1780 | 0.0 | 60.47982 | 2 |
ATGAGTG | 3045 | 0.0 | 45.543846 | 2 |
GTGTGGA | 3775 | 0.0 | 44.952717 | 4 |
TGAGTGG | 3295 | 0.0 | 43.085865 | 3 |
AGCGAGT | 935 | 0.0 | 42.798683 | 1 |
AATGAGT | 3065 | 0.0 | 41.932938 | 1 |