SRR2132767_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132767_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4609442
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	329792	7.154705493636756	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	145988	3.1671512517133307	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	25986	0.5637558732705608	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	22501	0.48815019258296344	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	11744	0.2547813813472433	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	11026	0.23920465861160634	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9019	0.19566359659151802	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	8429	0.18286378264440684	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7616	0.16522607291728586	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	6074	0.13177299985551397	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	5885	0.1276727204724563	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	6170	88.20511	1
ATCGAGT	2190	77.17407	1
AACGAGT	89355	74.404366	1
GTGGAAT	106160	74.18944	6
ACGAGTG	97745	73.714294	2
TGGAATC	106680	73.69524	7
CGAGTGG	101210	73.43102	3
GGAATCA	107330	73.29751	8
GAATCAC	107670	73.11842	9
TCGAGTG	2400	73.06595	2
AACGTGT	3320	72.74453	1
AGTGGAA	105515	72.02851	5
GAGTGGA	105745	71.991875	4
CGTGTGG	3765	71.296745	3
ACGTGTG	3745	68.29117	2
GCGAGTG	1215	54.94517	2
GTGTGGA	5900	47.806664	4
TGAGTGG	4725	44.075832	3
ATGAGTG	4325	43.80628	2
AGCGAGT	1475	43.088642	1