SRR2132766_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132766_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2124744
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	143574	6.757237577797608	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	78477	3.6934802498559827	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	11784	0.5546079904214343	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	10053	0.4731393523172674	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6375	0.30003614553094393	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4943	0.23263979095834603	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	4410	0.2075544159672883	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4172	0.19635306653413304	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3848	0.1811041706671486	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3387	0.15940743920208741	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	2999	0.14114641575643938	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2720	86.36039	1
AACGAGT	38875	73.9625	1
GTGGAAT	46150	73.79802	6
TGGAATC	46500	73.15652	7
GAATCAC	46640	73.148544	9
ACGAGTG	42680	73.066826	2
GGAATCA	46740	72.96187	8
CGAGTGG	44230	72.80741	3
GAGTGGA	46100	71.74885	4
AGTGGAA	46150	71.681305	5
ATCGAGT	1045	71.174385	1
AACGTGT	1275	69.78058	1
ACGTGTG	1370	69.65378	2
CGTGTGG	1505	67.77379	3
TCGAGTG	1155	67.153885	2
TGAGTGG	1910	50.695847	3
GCGAGTG	625	50.392277	2
ATGAGTG	1820	48.815712	2
AGCGAGT	610	48.61762	1
AATGAGT	1920	43.396526	1