SRR2132765_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132765_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2750178
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	177213	6.4436920082991	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	99381	3.6136206456454816	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	13715	0.4986949935604168	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	9359	0.34030524569682397	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8191	0.2978352673899653	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5847	0.2126044205138722	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4770	0.1734433189415376	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4245	0.15435364547312938	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4179	0.15195380080852947	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3686	0.13402768838962423	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3125	83.17189	1
AACGAGT	45815	74.89082	1
GTGGAAT	54350	74.07378	6
ACGAGTG	50085	73.986465	2
TGGAATC	54490	73.82499	7
CGAGTGG	51955	73.42655	3
GGAATCA	54815	73.41033	8
GAATCAC	54880	73.32339	9
GAGTGGA	54415	71.802475	4
AGTGGAA	54565	71.54478	5
ATCGAGT	1225	66.11194	1
AACGTGT	1550	65.91975	1
ACGTGTG	1695	63.239536	2
TCGAGTG	1435	58.971767	2
CGTGTGG	2060	54.99735	3
ATGAGTG	2110	45.453907	2
AATGAGT	2065	42.639202	1
AGTACTT	28750	41.407475	20-21
GAGTACT	28645	40.61584	20-21
TGAGTGG	2635	40.498333	3