SRR2132760_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132760_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2288004
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	128988	5.637577556682593	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32075	1.4018769197955947	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10520	0.45978940596257695	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4465	0.19514826023031429	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	4314	0.18854862141849402	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3719	0.1625434221268844	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3686	0.16110111695608922	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	3110	0.13592633579311925	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2959	0.12932669698129898	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2636	0.1152095887944252	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	2317	0.10126730547673868	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2635	85.740654	1
AACGAGT	30850	83.0442	1
ACGAGTG	34315	81.415375	2
CGAGTGG	35685	80.4203	3
GTGGAAT	38360	79.3394	6
TGGAATC	38760	78.368256	7
GAGTGGA	37780	78.2858	4
GGAATCA	38835	78.19099	8
GAATCAC	38955	78.034584	9
AGTGGAA	38100	77.41853	5
ATCGAGT	865	70.19396	1
AACGTGT	1240	69.463326	1
ACGTGTG	1420	65.87937	2
CGTGTGG	1555	62.87799	3
TCGAGTG	990	62.204357	2
AGTACTT	21855	40.826305	20-21
ATGAGTG	2205	40.72016	2
GAGTACT	21540	40.51786	20-21
ATCACTG	39725	39.899582	10-11
TGAGTAC	39590	39.756664	18-19