SRR2132757_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132757_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2224906
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	132176	5.940745361826522	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	12706	0.5710803063140645	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10514	0.4725592901452916	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	4846	0.21780695454100082	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4212	0.18931136866006923	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3683	0.16553508327992283	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3592	0.16144502284590898	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2964	0.13321911127930797	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2975	86.70109	1
AACGAGT	32505	81.97359	1
ACGAGTG	36420	80.39007	2
CGAGTGG	37875	79.532394	3
GTGGAAT	40240	79.25862	6
TGGAATC	40565	78.56491	7
GAATCAC	40680	78.36591	9
GGAATCA	40850	78.00527	8
GAGTGGA	39725	77.970406	4
AGTGGAA	40250	76.90668	5
ATCGAGT	895	71.523186	1
AACGTGT	1370	61.841908	1
ACGTGTG	1480	60.98643	2
CGTGTGG	1570	60.781376	3
TCGAGTG	1130	59.90702	2
TGAGTGG	2210	43.817654	3
ATGAGTG	2005	43.610622	2
AGTACTT	22230	41.248116	20-21
GAGTACT	21830	41.045864	20-21
GTGTGGA	2555	40.47678	4