SRR2132755_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132755_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3557341
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	281265	7.906607772490745	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	78389	2.203584081481084	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	27890	0.784012553196334	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	22185	0.6236399602961875	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9513	0.26741883895864915	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	8763	0.24633567600069825	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	8446	0.23742452579047102	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7929	0.22289119879145688	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6623	0.1861783843606784	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6488	0.18238341502824723	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGAACAAGCGAATAAGTGCA	5497	0.1545255290398081	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	5910	86.75541	1
AACGTGT	2795	75.803085	1
ACGTGTG	3105	70.09173	2
CGTGTGG	3280	69.932846	3
ATCGAGT	2095	69.443344	1
TCGAGTG	2235	68.35232	2
GTGGAAT	103745	67.496895	6
TGGAATC	104385	67.0684	7
AACGAGT	88370	66.34229	1
GGAATCA	105510	66.33992	8
GAATCAC	105770	66.212395	9
ACGAGTG	96775	65.99451	2
CGAGTGG	100325	65.67213	3
AGTGGAA	103775	65.14663	5
GAGTGGA	104120	64.98494	4
AGCGAGT	1120	55.91004	1
ATGAGTG	3435	55.42117	2
AATGAGT	3410	53.295322	1
TGAGTGG	3855	53.28344	3
GTGTGGA	4760	51.250202	4