SRR2132754_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132754_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3309639
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	254409	7.686910868526748	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	80086	2.419780525912343	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	20083	0.6068033401830231	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	10185	0.3077374904030319	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8573	0.2590312719906914	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7076	0.2137997527827053	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6803	0.20555111901932507	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5892	0.1780254583657009	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5648	0.17065305309733175	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	5007	0.15128538188001775	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGAACAAGCGAATAAGTGCA	3426	0.10351582151406846	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	4840	85.88057	1
AACGAGT	60840	79.26108	1
ACGAGTG	66970	78.48075	2
CGAGTGG	70145	77.215866	3
GTGGAAT	74400	77.14333	6
TGGAATC	75005	76.48678	7
GAATCAC	75585	75.9586	9
GAGTGGA	73355	75.87888	4
GGAATCA	75650	75.868484	8
AGTGGAA	73705	75.29534	5
AACGTGT	2380	65.86381	1
CGTGTGG	2760	64.21074	3
ATCGAGT	1795	62.6777	1
TCGAGTG	1880	62.51494	2
ACGTGTG	2740	60.05085	2
ATGAGTG	3205	49.871513	2
AATGAGT	3040	48.622314	1
TGAGTGG	3570	48.061802	3
GCGAGTG	1210	43.903053	2
GTGTGGA	4380	43.78732	4