SRR2132750_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132750_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2635199
Sequences flagged as poor quality	0
Sequence length	50
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	188493	7.152894335494207	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	110644	4.198696189547734	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	18873	0.7161887963679403	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	14322	0.5434883665332296	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8304	0.3151185166661038	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5646	0.21425326891821073	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4643	0.17619162727368975	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4249	0.16124019476327975	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3042	0.11543720227580535	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2767	0.10500155775711814	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2661	0.10097909114264235	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3815	42.526443	1
ATCGAGT	1220	39.569454	1
AACGAGT	52235	38.798832	1
GAGTACT	30475	38.57368	20
AGTACTT	30385	38.34044	21
GTACTTT	30060	38.154907	22
ACGAGTG	57920	37.82254	2
TACTTTT	30400	37.50457	23
CGAGTGG	60390	37.294964	3
CATGGGG	13365	37.21416	25
ACTTTTT	30695	36.950634	24
GAGTGGA	62595	36.755848	4
GTGGAAT	63830	36.470726	6
GCTGAGT	63855	36.45711	17
AGTGGAA	63090	36.38239	5
CTGAGTA	63640	36.303757	18
TGGAATC	64180	36.273197	7
TGAGTAC	63515	36.247063	19
TGCTGAG	64480	36.175377	16
CTGCTGA	64550	36.156593	15