SRR2132748_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132748_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4864294
Sequences flagged as poor quality	0
Sequence length	50
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	367399	7.5529768554285575	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	101568	2.0880316855847942	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	28278	0.5813382168100859	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	23031	0.473470559139723	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9003	0.18508338517367576	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8541	0.17558560399515327	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8540	0.17556504602723438	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	8169	0.16793803992932993	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	7026	0.14444028259805022	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5027	0.10334490472820929	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	6695	43.031425	1
AACGAGT	89255	40.07681	1
GAGTACT	58010	39.709846	20
ACGAGTG	98225	39.357388	2
AGTACTT	58210	39.346672	21
GTACTTT	57170	39.281357	22
ATCGAGT	2085	39.221893	1
CGAGTGG	101820	38.94503	3
GAGTGGA	105120	38.498905	4
GTGGAAT	107035	38.316624	6
GCTGAGT	107055	38.261982	17
TGAGTAC	105810	38.204926	19
AGTGGAA	106170	38.100407	5
TGCTGAG	107755	38.099167	16
TGGAATC	107615	38.089844	7
CTGAGTA	106490	38.086967	18
CTGCTGA	107885	38.057335	15
TACTTTT	58795	37.990295	23
CATGGGG	21300	37.871037	25
ACTTTTT	58755	37.84019	24