SRR2132747_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132747_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2860324
Sequences flagged as poor quality	0
Sequence length	50
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	193991	6.782133772257969	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	107659	3.7638743023517613	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	14935	0.5221436452653615	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	13816	0.4830222030790917	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8406	0.29388279090061126	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6180	0.2160594394201496	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4865	0.1700856266632731	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4406	0.15403849354129112	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	4094	0.14313063834726414	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3898	0.13627826777665747	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2963	0.1035896632689164	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3840	42.816498	1
AACGAGT	49095	39.455334	1
GAGTACT	30435	39.01529	20
AGTACTT	30425	38.673836	21
GTACTTT	30050	38.61475	22
ATCGAGT	1275	38.374813	1
ACGAGTG	54910	38.32923	2
CGAGTGG	57085	37.959568	3
GAGTGGA	59070	37.463074	4
ACTTTTT	31010	37.30582	24
GTGGAAT	60450	37.07112	6
TACTTTT	31205	37.044506	23
TGGAATC	60720	36.903698	7
GCTGAGT	60585	36.8787	17
TGAGTAC	59855	36.876434	19
CTGCTGA	60865	36.82108	15
AGTGGAA	60120	36.780586	5
CATGGGG	12545	36.71819	25
GGAATCA	61060	36.71262	8
TGCTGAG	61035	36.693295	16