SRR2132745_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132745_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3751861
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	266812	7.111457487364271	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	60580	1.61466536206965	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	25936	0.6912836056559665	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	20149	0.5370401515407953	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6373	0.16986236963469595	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6030	0.16072023990227782	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5405	0.14406184024408153	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	5114	0.13630568936322535	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5034	0.13417341420697623	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	4361	0.11623564945503045	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3840	0.10234920749995803	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	4940	42.62874	1
GAGTACT	40555	39.66479	20
ATCGAGT	1560	39.437164	1
GTACTTT	39715	39.252007	22
AGTACTT	40585	39.2344	21
AACGAGT	68300	38.542236	1
ACTTTTT	40710	38.071114	24
ACGAGTG	74925	37.97535	2
TACTTTT	41015	37.868446	23
CATGGGG	17945	37.766106	25
CGAGTGG	77745	37.563183	3
GCTGAGT	80745	37.318764	17
TGAGTAC	79870	37.275936	19
GAGTGGA	80235	37.13873	4
CTGAGTA	80440	37.12118	18
TGCTGAG	81425	37.05573	16
CTGCTGA	81605	36.97669	15
GTGGAAT	81525	36.928364	6
AGTGGAA	80915	36.744568	5
TGGAATC	81925	36.739265	7