SRR2132742_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132742_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3821069
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	244827	6.407290734608562	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	113081	2.959407432841438	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	26887	0.7036512557088083	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	19238	0.5034716724560587	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8793	0.2301188489399171	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	7165	0.18751297084664004	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6139	0.1606618462006313	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5813	0.1521302023072601	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	4746	0.12420607950288257	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGTCAAGTAATTAAGTGCATG	4354	0.11394717028140554	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	4805	42.987064	1
ATCGAGT	1635	38.829906	1
GAGTACT	37865	38.684353	20
AGTACTT	38095	38.16786	21
GTACTTT	37950	37.931133	22
AACGAGT	67065	37.60622	1
CATGGGG	18610	37.150295	25
TACTTTT	38910	36.859604	23
ACGAGTG	74110	36.84957	2
ACTTTTT	38965	36.711605	24
CGAGTGG	77285	36.368114	3
GAGTGGA	79830	35.94726	4
GCTGAGT	80920	35.844418	17
TGAGTAC	79940	35.840813	19
CTGAGTA	80285	35.78544	18
TGCTGAG	81330	35.685352	16
CTGCTGA	81615	35.625423	15
GTGGAAT	81545	35.60755	6
TGGAATC	81815	35.52536	7
AGTGGAA	81150	35.339	5