SRR2132740_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132740_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3467040
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	201968	5.82537265217592	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	66061	1.9054005722460658	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	19861	0.5728517698094051	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15922	0.4592390050302275	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5797	0.16720314735336195	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5322	0.15350269970926209	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5022	0.1448497854077253	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4687	0.13518736443767593	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	3939	0.11361276477917762	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3641	0.10501753657298443	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3915	42.898827	1
GAGTACT	31470	39.283974	20
AGTACTT	31735	38.630146	21
GTACTTT	31440	38.628788	22
ATCGAGT	1445	38.43748	1
AACGAGT	55780	37.968365	1
ACGAGTG	61125	37.396862	2
ACTTTTT	32395	37.32025	24
TACTTTT	32640	37.100777	23
CGAGTGG	63795	36.896275	3
CATGGGG	16480	36.854034	25
GCTGAGT	66710	36.500034	17
CTGAGTA	66290	36.492367	18
TGAGTAC	66135	36.48809	19
GAGTGGA	66000	36.470276	4
GTGGAAT	67215	36.261147	6
TGCTGAG	67340	36.256557	16
CTGCTGA	67470	36.18996	15
AGTGGAA	66855	35.98256	5
TGGAATC	67855	35.940273	7