SRR2132739_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132739_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2713770
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	135419	4.990069165773075	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	48632	1.7920457518507464	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10939	0.40309237702531897	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	8279	0.30507375348684673	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4629	0.17057451442089785	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3893	0.14345357196814762	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3450	0.12712941774726672	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3318	0.12226533567693651	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2900	41.957428	1
AACGAGT	34850	40.050312	1
GAGTACT	20810	39.01671	20
ACGAGTG	38955	38.996635	2
GTACTTT	20705	38.545235	22
AGTACTT	20975	38.41613	21
CGAGTGG	40785	38.275055	3
GAGTGGA	42585	37.55162	4
GTGGAAT	43220	37.50822	6
TGAGTAC	42640	37.448833	19
CTGAGTA	42825	37.410336	18
GAATCAC	43480	37.25726	9
GCTGAGT	43415	37.195816	17
TGGAATC	43595	37.184208	7
GGAATCA	43625	37.118298	8
AATCACT	43585	37.021137	10
AGTGGAA	43240	37.01772	5
TACTTTT	21515	36.98161	23
ACTTTTT	21525	36.954212	24
TGCTGAG	43860	36.90369	16