SRR2132738_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132738_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3423896
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	248439	7.256032309392575	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	37487	1.094863862687418	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	19502	0.5695850574900639	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	8404	0.24545138053258625	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	7035	0.20546768943916519	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6186	0.1806713755324344	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5691	0.16621416071048886	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4295	0.1254418942631435	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3942	0.11513200167294801	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3650	0.10660370525272965	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	5025	42.80608	1
AACGAGT	58865	42.1985	1
ACGAGTG	65070	41.51567	2
CGAGTGG	67600	40.94622	3
GAGTACT	37310	40.55176	20
GAGTGGA	70045	40.37496	4
AGTACTT	37200	40.358265	21
GTACTTT	37025	40.228195	22
GTGGAAT	71300	40.105526	6
TGGAATC	71510	39.981754	7
AGTGGAA	70675	39.937237	5
TGAGTAC	71080	39.813942	19
GGAATCA	72010	39.771347	8
CTGAGTA	71445	39.749092	18
GAATCAC	72050	39.742584	9
GCTGAGT	72280	39.64293	17
AATCACT	72265	39.53911	10
CTGCTGA	72660	39.477985	15
TGCTGAG	72730	39.412766	16
ATCACTG	72950	39.224556	11