SRR2132735_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132735_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3461183
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	205671	5.942216866314205	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	82737	2.3904254701355	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	16209	0.46830809003742363	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	15597	0.45062627431141317	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6487	0.1874214683245584	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5093	0.14714622139309017	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	4876	0.14087668869285444	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4673	0.13501164197327908	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4248	0.12273260327466072	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3607	0.10421292373156807	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	4155	42.74837	1
GAGTACT	32090	40.265083	20
AGTACTT	32255	39.85452	21
GTACTTT	31865	39.796944	22
AACGAGT	52310	39.587685	1
ACGAGTG	57760	38.967762	2
CGAGTGG	60040	38.545242	3
ACTTTTT	32870	38.413406	24
CATGGGG	15815	38.347603	25
TGAGTAC	61605	38.284607	19
GCTGAGT	62615	38.24672	17
CTGAGTA	61875	38.2242	18
TACTTTT	33165	38.191113	23
TGCTGAG	63020	38.060265	16
GAGTGGA	62140	38.056858	4
CTGCTGA	63225	37.96469	15
GTGGAAT	63055	37.944202	6
TGGAATC	63315	37.7723	7
ATCGAGT	1305	37.657364	1
AGTGGAA	62770	37.646862	5