SRR2132734_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132734_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3065937
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	198028	6.458971596611411	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	50903	1.6602754720661255	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15388	0.5019020286457289	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	11967	0.39032113184321793	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4926	0.16066866344611777	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4450	0.14514323027511655	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4044	0.13190094904102725	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	3650	0.11905006528183718	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3528	0.11507085762036207	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3875	42.43604	1
AACGAGT	48280	40.675175	1
GAGTACT	30705	40.390877	20
GTACTTT	30300	40.04506	22
ACGAGTG	53290	39.98236	2
AGTACTT	30810	39.881966	21
CGAGTGG	55205	39.589207	3
ATCGAGT	1170	39.56409	1
GAGTGGA	57195	39.024033	4
TGAGTAC	57355	39.000866	19
GTGGAAT	58250	38.878742	6
CTGAGTA	57765	38.849716	18
TACTTTT	31220	38.815678	23
CATGGGG	14745	38.787865	25
GCTGAGT	58515	38.757767	17
AGTGGAA	57655	38.673256	5
TGGAATC	58620	38.610176	7
ACTTTTT	31355	38.56437	24
TGCTGAG	58915	38.539425	16
CTGCTGA	58995	38.513268	15