SRR2132731_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132731_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5034690
Sequences flagged as poor quality	0
Sequence length	50
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	285650	5.673636311272392	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	46168	0.9169978687863601	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	22439	0.44568781791927603	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	17333	0.3442714447165565	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7034	0.13971068725184668	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6486	0.12882620379804915	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	6485	0.12880634160196558	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6333	0.1257872877972626	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	5475	42.87486	1
AACGAGT	72885	40.801434	1
ACGAGTG	80365	39.964775	2
CGAGTGG	83850	39.295124	3
GAGTACT	44860	39.03596	20
GAGTGGA	87075	38.651146	4
AGTACTT	45095	38.583767	21
GTACTTT	44600	38.55825	22
ATCGAGT	1675	38.424244	1
GTGGAAT	88765	38.418392	6
AGTGGAA	88160	38.130543	5
TGGAATC	89740	38.011166	7
TGAGTAC	88535	37.91866	19
GCTGAGT	89770	37.84786	17
GGAATCA	90350	37.800793	8
CTGAGTA	89290	37.745846	18
GAATCAC	90525	37.74192	9
CTGCTGA	90645	37.63054	15
TGCTGAG	90720	37.541237	16
AATCACT	90955	37.5127	10