SRR2132729_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132729_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2046319
Sequences flagged as poor quality	0
Sequence length	50
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	112245	5.485215159513253	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	49435	2.4158012509291074	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8531	0.41689492205272005	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	5680	0.2775715809705134	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4570	0.223327838914656	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3886	0.18990196543158716	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2776	0.13565822337572978	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2482	0.12129096196634052	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2360	41.85326	1
AACGAGT	29115	40.627136	1
ACGAGTG	32665	39.19363	2
CGAGTGG	33980	38.499023	3
GAGTACT	17970	38.1646	20
GAGTGGA	35375	37.926956	4
AGTACTT	18000	37.685528	21
GTGGAAT	35955	37.67612	6
ATCGAGT	650	37.650684	1
GTACTTT	17780	37.533283	22
AGTGGAA	35785	37.400204	5
TGGAATC	36240	37.371014	7
GGAATCA	36500	37.14097	8
GAATCAC	36755	36.97216	9
AATCACT	36895	36.748398	10
TGAGTAC	36530	36.56675	19
GCTGAGT	37090	36.554302	17
CTGAGTA	36680	36.52515	18
ATCACTG	37240	36.49566	11
TGCTGAG	37525	36.200893	16