SRR2132728_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132728_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3012763
Sequences flagged as poor quality	0
Sequence length	50
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	207245	6.878901526605312	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	61425	2.0388261539324533	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15843	0.5258628043427246	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGTGACAAAGCGTAC	8750	0.290431076058754	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	6505	0.2159147599728223	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6055	0.20097830463265778	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5992	0.19888720088503475	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5215	0.17309692133101742	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4818	0.1599196485086945	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	3979	0.13207145733003228	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	4115	43.121845	1
AACGAGT	52790	42.0943	1
ACGAGTG	58870	40.798443	2
CGAGTGG	62005	39.76199	3
ATCGAGT	1275	39.59101	1
GAGTGGA	64460	39.152683	4
AGTGGAA	65245	38.654	5
GTGGAAT	65955	38.648155	6
TGGAATC	66470	38.373917	7
GGAATCA	67245	37.951286	8
GAGTACT	33575	37.809807	20
GAATCAC	67955	37.53472	9
AGTACTT	33620	37.451687	21
AATCACT	68260	37.299335	10
GTACTTT	33445	37.18725	22
ATCACTG	68845	37.026505	11
GCTGAGT	68680	36.832993	17
TGAGTAC	68245	36.67775	19
TCACTGC	69595	36.66858	12
TGCTGAG	69265	36.66164	16