SRR2132726_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132726_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2382886
Sequences flagged as poor quality	0
Sequence length	50
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	132970	5.580208201315548	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	57307	2.404940899396782	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10742	0.45079789801106723	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	10287	0.4317034050307065	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5577	0.23404392824499368	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4573	0.19191014593228548	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3401	0.14272608928836714	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3125	0.1311434957442362	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2675	43.006794	1
AACGAGT	34815	39.121227	1
GAGTACT	21355	37.74283	20
ACGAGTG	39190	37.73526	2
ATCGAGT	770	37.49479	1
AGTACTT	21430	37.28226	21
GTACTTT	21245	37.09955	22
CGAGTGG	40995	36.9945	3
CATGGGG	10280	36.31343	25
GAGTGGA	42930	36.26555	4
GTGGAAT	43805	36.10864	6
TGGAATC	44045	35.97031	7
AGTGGAA	43320	35.964447	5
GCTGAGT	44200	35.72895	17
GGAATCA	44335	35.72014	8
TGAGTAC	43700	35.644432	19
GAATCAC	44510	35.579697	9
CTGAGTA	43965	35.549667	18
ACTTTTT	22005	35.53831	24
TACTTTT	22100	35.3955	23