SRR2132725_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132725_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7987021
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	363962	4.556918029888741	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	122653	1.5356539065065686	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	28927	0.3621750838015826	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	20734	0.25959616232385013	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	13483	0.16881137535509172	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10212	0.1278574327023805	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	9656	0.12089613887330457	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9279	0.11617598100718653	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8554	0.10709875434157491	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	7180	42.48417	1
AACGAGT	90585	40.07552	1
ATCGAGT	2300	38.809914	1
ACGAGTG	101460	38.796295	2
GAGTACT	58070	38.55064	20
CGAGTGG	105975	38.181793	3
AGTACTT	58390	38.019154	21
GTACTTT	57585	37.977646	22
GAGTGGA	110070	37.566986	4
GTGGAAT	112730	37.192863	6
AGTGGAA	111670	37.01992	5
TGGAATC	113630	36.935383	7
TGAGTAC	112245	36.75281	19
GAATCAC	114525	36.738243	9
GGAATCA	114555	36.694748	8
CTGAGTA	113075	36.59392	18
GCTGAGT	114660	36.542736	17
AATCACT	115200	36.490517	10
ACTTTTT	60125	36.153755	24
ATCACTG	116725	36.08094	11