SRR2132724_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132724_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2240382
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	120136	5.362299822083912	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	39057	1.7433187733163362	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9299	0.41506314548144024	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	6706	0.2993239545756036	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5137	0.22929125479494122	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3197	0.14269887903045106	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3020	0.1347984406230723	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2771	0.12368426455845476	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2465	42.82881	1
AACGAGT	31435	39.901806	1
ACGAGTG	35400	38.485775	2
GAGTACT	18875	38.236923	20
CGAGTGG	37160	37.721832	3
AGTACTT	19065	37.705864	21
GTACTTT	18985	37.389706	22
ATCGAGT	825	37.13456	1
GAGTGGA	38715	37.12889	4
GTGGAAT	39455	36.894485	6
TGGAATC	39775	36.634743	7
AGTGGAA	39280	36.588413	5
GGAATCA	40030	36.47831	8
GAATCAC	40120	36.40744	9
TGAGTAC	39685	36.27276	19
AATCACT	40210	36.254833	10
GCTGAGT	40285	36.251247	17
ATCACTG	40470	36.11271	11
CTGCTGA	40560	36.054268	15
CTGAGTA	40115	36.026512	18