SRR2132722_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132722_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2357613
Sequences flagged as poor quality	0
Sequence length	50
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	180824	7.669791437356343	No Hit
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	162715	6.901684033808772	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	17300	0.7337930355830241	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	13849	0.5874161705080521	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	12409	0.526337443846806	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4920	0.20868564942592358	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4634	0.1965547356584817	No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4558	0.19333113619580483	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4072	0.1727170659476343	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3684	0.15625974237502083	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3441	0.1459527072509356	No Hit
AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3222	0.13666365090453778	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2883	0.12228470066970279	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3165	43.043736	1
ATCGAGT	1000	38.577427	1
GAGTACT	26000	38.4323	20
AACGAGT	46300	37.97038	1
AGTACTT	26105	37.932266	21
GTACTTT	25740	37.889088	22
AACGTGT	735	37.490208	1
ACGAGTG	50945	37.207672	2
CGAGTGG	53010	36.692043	3
TACTTTT	26515	36.682095	23
ACTTTTT	26410	36.653038	24
GAGTGGA	54925	36.235416	4
CATGGGG	12165	36.197533	25
GTGGAAT	56080	36.01015	6
AGTGGAA	55440	35.874245	5
GCTGAGT	56355	35.80579	17
TGAGTAC	55390	35.66717	19
TGCTGAG	56665	35.640965	16
CTGAGTA	55955	35.59398	18
CTGCTGA	56835	35.592403	15