SRR2132721_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132721_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2580852
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	136793	5.300303930639959	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	47148	1.8268385788879022	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10598	0.410639587237083	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	9789	0.3792933496380265	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3687	0.14285979978704708	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3352	0.1298795901508494	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3221	0.1248037469796796	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3214	0.1245325187186247	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2665	42.01312	1
AACGAGT	36225	39.91904	1
GAGTACT	21085	39.538937	20
ACGAGTG	39870	39.14134	2
AGTACTT	21280	38.876854	21
GTACTTT	21105	38.761467	22
CGAGTGG	41675	38.540436	3
ATCGAGT	980	38.008358	1
GAGTGGA	43325	37.96707	4
CATGGGG	11155	37.80175	25
TGAGTAC	43465	37.794098	19
GTGGAAT	44240	37.762897	6
GCTGAGT	44085	37.751556	17
CTGAGTA	43765	37.665707	18
TGGAATC	44525	37.519005	7
AGTGGAA	43890	37.457542	5
GAATCAC	44695	37.414948	9
TGCTGAG	44775	37.2877	16
GGAATCA	44860	37.27805	8
AATCACT	44785	37.2759	10