SRR2132703_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132703_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3987524
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	282830	7.092872669857285	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	86345	2.165378816528753	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	22402	0.5618022612528476	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	9775	0.2451395903824027	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6406	0.16065107068948048	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5430	0.13617472897968766	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	4288	0.10753540292171282	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	4143	0.10389906117179483	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGAGT	81850	75.07874	1
TACGAGT	1720	74.35904	1
ACGAGTG	85230	73.69454	2
GTGGAAT	88095	73.001015	6
CGAGTGG	87195	72.42721	3
TGGAATC	89335	72.192856	7
GAATCAC	89800	71.93414	9
GGAATCA	89810	71.88951	8
AGTGGAA	88700	71.68041	5
GAGTGGA	90020	70.697205	4
CGTGTGG	1670	48.117825	3
ATCGAGT	795	45.542503	1
AACGTGT	1480	44.161762	1
ACGTGTG	1770	42.21339	2
GAGTACT	40720	41.59689	20-21
AGTACTT	41620	41.572422	20-21
GTACTTT	41380	40.207897	22-23
TCGAGTG	1030	40.14873	2
CATGGGG	20285	39.33984	24-25
TACTTTT	45085	37.88348	22-23