SRR2132701_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132701_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5504289
Sequences flagged as poor quality	0
Sequence length	100
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	405330	7.363893865311215	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	186179	3.3824350429274332	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	36616	0.6652266986708001	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	9350	0.16986753420832373	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	8606	0.1563508020745277	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7654	0.1390551985914984	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	6183	0.11233058438610327	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	5625	0.10219303528575625	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2210	79.56868	1
AACGAGT	120215	72.52049	1
ACGAGTG	124860	71.3345	2
GTGGAAT	130225	70.43401	6
CGAGTGG	127820	70.307556	3
TGGAATC	131275	70.01024	7
GAATCAC	131400	69.94721	9
GGAATCA	131790	69.76875	8
AGTGGAA	130270	69.42536	5
GAGTGGA	131900	68.59948	4
AACGTGT	1980	52.479527	1
CGTGTGG	2415	50.98075	3
TCGAGTG	1375	49.55499	2
ACGTGTG	2365	49.276817	2
ATCGAGT	1365	42.02329	1
GAGTACT	58955	41.493275	20-21
AGTACTT	60340	41.35083	20-21
GTACTTT	59100	40.586422	22-23
CATGGGG	27915	39.19392	24-25
TACTTTT	63720	38.407063	22-23