SRR2132698_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132698_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5323990
Sequences flagged as poor quality	0
Sequence length	100
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	393693	7.394698337149394	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	306649	5.759759128022404	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	51180	0.9613090933679439	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	11743	0.22056765696404387	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7816	0.14680718784220106	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	7494	0.14075909233488418	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	7113	0.13360280541473596	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	6785	0.12744201247560571	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	6521	0.12248332547581794	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6464	0.12141269987359105	No Hit
GTTCCCATGTACTCAGCAGTGATTCCACTCGTTCCCATGTACTCAGCAGT	6038	0.11341118221484263	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2235	75.7329	1
AACGAGT	133770	64.405235	1
GTGGAAT	142715	63.36402	6
ACGAGTG	139200	63.16124	2
TGGAATC	144070	63.01862	7
GAATCAC	144860	62.691162	9
GGAATCA	145235	62.542236	8
AGTGGAA	142950	62.293316	5
CGAGTGG	142975	61.97346	3
GAGTGGA	146505	60.833065	4
ACGTGTG	2330	54.456177	2
CGTGTGG	2440	54.31235	3
AACGTGT	2125	53.323395	1
TCGAGTG	1430	46.993668	2
ATCGAGT	1305	46.837368	1
AGTACTT	57190	41.217617	20-21
GAGTACT	56550	40.574677	20-21
GTACTTT	56995	39.41403	22-23
TACTTTT	61335	37.866405	22-23
CATGGGG	26065	37.440716	24-25