SRR2132697_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132697_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2694567
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	215590	8.000914432634259	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	47432	1.7602828209504533	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	13470	0.4998947882906605	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4165	0.1545702890297402	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4136	0.1534940493222102	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3451	0.12807252519607046	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	3312	0.122913996942737	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	2784	0.10331901192288037	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGAGT	58215	77.11339	1
ACGAGTG	60525	75.736595	2
TACGAGT	1245	74.76574	1
CGAGTGG	62095	74.525475	3
GTGGAAT	63570	74.218796	6
GAATCAC	64110	73.88086	9
TGGAATC	64170	73.788445	7
GGAATCA	64395	73.48685	8
AGTGGAA	63605	73.236435	5
GAGTGGA	64030	72.831055	4
ATCGAGT	545	55.20651	1
TCGAGTG	685	50.077843	2
CGTGTGG	1230	44.698612	3
AGTACTT	29975	42.102074	20-21
GAGTACT	29535	41.97351	20-21
AACGTGT	975	41.948982	1
GTACTTT	29865	40.811768	22-23
ACGTGTG	1245	38.875965	2
CATGGGG	14940	38.802734	24-25
TACTTTT	32175	38.619316	22-23