SRR2132694_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132694_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3701641
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	243133	6.568249054946171	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	118146	3.1917195643769887	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	35432	0.957197091776323	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6858	0.18526918196551206	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	5152	0.13918151436079296	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4876	0.13172536180575048	No Hit
GTTCCCATGTACTCAGCAGTGATTCCACTCGTTCCCATGTACTCAGCAGT	4236	0.11443573269260848	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	3964	0.10708764031952314	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	1580	69.33479	1
AACGAGT	89660	60.986454	1
GTGGAAT	94795	60.673077	6
TGGAATC	96000	60.090984	7
ACGAGTG	93100	59.940334	2
GGAATCA	96475	59.82435	8
GAATCAC	96530	59.79594	9
AGTGGAA	95690	59.2298	5
CGAGTGG	95465	59.05596	3
GAGTGGA	97845	57.946064	4
TCGAGTG	910	50.608086	2
CGTGTGG	1615	50.04851	3
ATCGAGT	835	46.73519	1
ACGTGTG	1685	45.738213	2
AACGTGT	1440	44.73119	1
AGTACTT	35420	40.619324	20-21
GAGTACT	35180	39.9146	20-21
GTACTTT	35215	39.08248	22-23
CATGGGG	18465	37.68238	24-25
TACTTTT	37550	37.640923	22-23