SRR2132691_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132691_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1813422
Sequences flagged as poor quality	0
Sequence length	100
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	177805	9.804943361225352	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20444	1.127371345445241	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	11819	0.651751219517575	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4639	0.25581469729605133	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3247	0.179053744798508	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	2800	0.15440421479390898	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2063	0.11376281968565508	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	2047	0.11288050988683275	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGAGT	51040	75.57204	1
ACGAGTG	53315	73.88525	2
GTGGAAT	55635	72.89107	6
CGAGTGG	54650	72.63074	3
TGGAATC	56090	72.58462	7
AGTGGAA	55500	72.06877	5
GGAATCA	56495	72.06428	8
GAATCAC	56870	71.62213	9
GAGTGGA	55900	71.51104	4
TACGAGT	1205	64.38667	1
CGTGTGG	910	60.423233	3
ACGTGTG	895	57.23517	2
AACGTGT	805	56.075665	1
TCGAGTG	560	45.31743	2
ATCGAGT	555	42.361965	1
AGTACTT	24370	42.167458	20-21
GAGTACT	24175	41.389736	20-21
GTACTTT	24090	40.75652	22-23
GTGTGGA	1450	40.513664	4
CGATTGG	360	40.468647	3