SRR2132690_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132690_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4011697
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	273916	6.827933415709113	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	132240	3.29636061746438	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	26348	0.6567794128021135	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	11014	0.2745471554805859	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	7150	0.17822881438952146	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5715	0.14245841597707903	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	5629	0.14031468478302325	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	5454	0.1359524410741888	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5024	0.1252337851039099	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	4114	0.1025501178179708	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3055	83.33665	1
AACGAGT	85435	67.49267	1
GTGGAAT	95130	66.84047	6
ACGAGTG	90760	66.71609	2
TGGAATC	96710	66.142044	7
GAATCAC	97435	65.784935	9
CGAGTGG	93560	65.61147	3
GGAATCA	97635	65.58761	8
AGTGGAA	95885	64.78018	5
GAGTGGA	96545	64.35194	4
CGTGTGG	2215	62.58574	3
AACGTGT	1905	61.017155	1
ATCGAGT	1250	56.095272	1
ACGTGTG	2300	55.622776	2
TCGAGTG	1590	50.87951	2
CGATTGG	620	45.47646	3
AGTACTT	41800	40.74909	20-21
GACGAGT	1110	40.70036	1
GAGTACT	40910	40.532806	20-21
GTGTGGA	3865	40.244415	4