SRR2132686_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132686_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2581353
Sequences flagged as poor quality	0
Sequence length	100
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	173097	6.705669468685607	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	95585	3.70290308996871	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	12601	0.4881548552251474	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6856	0.2655971500217134	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	4243	0.16437116504406799	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4079	0.15801790766315185	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3626	0.14046897111708473	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3062	0.11861996402661706	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	1800	83.13001	1
AACGAGT	46950	73.32319	1
ACGAGTG	49770	72.42853	2
GTGGAAT	52325	71.93869	6
CGAGTGG	50865	71.54603	3
TGGAATC	52955	71.46443	7
GAATCAC	53055	71.329735	9
GGAATCA	53445	70.87957	8
AGTGGAA	52475	70.165855	5
GAGTGGA	52735	69.793175	4
AACGTGT	960	58.32825	1
CGTGTGG	1195	58.201347	3
ATCGAGT	640	55.877483	1
TCGAGTG	740	53.377235	2
ACGTGTG	1205	51.120224	2
CGATTGG	375	42.607582	3
GAGTACT	26590	41.7093	20-21
AGTACTT	27195	41.498535	20-21
GTACTTT	26750	40.62536	22-23
TACTTTT	29200	38.10188	22-23